Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00590 ATGAGAACCCTTCTTTTTAGAGTTTCTCGTCACTTATCCCTACCCCAAAAAACTTCCTTCTCCTTAGTTGCTCTCCTCCTTCGTGGATGGCCATCGGCCACCTTAGAGAGAATGGTGATGAGCTTCTGCACCAGAGTGGGAGCTTCCACGACACATGCATGTACGAATCTGTCATCGGATAATATGGATGATGTGAGGGTTATGATGAGGAAGAGCATGGATGACCCTGGCATTGTCATCTGGTTGTGGAAGGTAGACGTCTTCATCTTGCACGCCAGCCGCATCTACCCTAAACCCTCTACTCCATCTCCGTATCTAGTGCTTGTTTCCTCGTGTGGCTTTGGCCCTGTTTTTGTTTGTCGCGAATTCCTCTTCTCCGCTATGCATGTCTTTAGTTTCCATGGAGGCCAGGTATAA 417 0.482 MRTLLFRVSRHLSLPQKTSFSLVALLLRGWPSATLERMVMSFCTRVGASTTHACTNLSSDNMDDVRVMMRKSMDDPGIVIWLWKVDVFILHASRIYPKPSTPSPYLVLVSSCGFGPVFVCREFLFSAMHVFSFHGGQV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00590 138 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 36 77 IPR042160 -
Aip01g00590 138 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-LIKE 36 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00590 Aip-Chr1 8857952 8858368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00590 36 77 Homeobox Transcription Factor Family AT4G21750 78.571 9.20e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00590 K09338 - pop:7458546 67.781