Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00576 ATGGATGAAAGTGAAAGTGGTGACATTGATTGGGAAAATGAACTGAGAAATTTTCAGAATGCAATAGCCACAGGGACCAAGTCCAAGAGAATCAAAGCCATGGCAATGCTTGCTCGTTACTCCAAACACGCCCCTGAACATGTATTGGCTCGCACCATACCCTTTCTTATGGTGATCCTTGGCCACAATAACCGTTCAAATGATTCTGCCAATTTCTCTCTTCAAATGGCTTCAGCTTATTGCTTGAAGTGCATAGCTTGCAGGAGTGACGAGTTGGTAACTCAAATGGGTGCAAACGGTGCTGCGCAATTGCTTATGAATTTGTTGCCTCATTCTGATGGGATGTTTCTGAAAGTTCTTGTGAAATGCTTGTTGGTTGTGGTTGGTTTTTGTAACACAAGTAGGGCTGTTGTTGCAACTGGTGGTGGGTTAGGTATCATTGTAAATAAGTTGAGTTCTTGCGAGGATCGGGAAATTCGAAGGTATTTGTTGGAGATTCTGAGTTTGTTGGCGCTACGGCGGAATGTTAGGAGGGAAATAGTTAGGCTTGATGCTCTTCACTATGTTGTGGAGGCTGTTGGTGTTGGTAGTATGGTCTCTAGAGAAAGGGCATGCCAAGCAATTGGGATGTTTGGAGTTACAAGAGAAGGTAGGCGGGCTGTTGTTGAATTGGGTGCAATACTCCCAGTTGTGGAGCTATTTTGCAGCAGAGATCACACCACGAAGCTTGTGGCTGGGAATACTCTTGGTGTGATCTCTGCCTATGTTGATTGCATTAGGTCAATTGCTCAAGCTGGGGCTATCCCCCTTTATTCCGAGCTTCTTGAAGGGGGCGATCCTTCTGGTAAGGACATCGCGGAGGACGCATTTTGCGTGTTGGCTGGAGAGAAATTTCCATGTATAGAATAG 909 0.4532 MDESESGDIDWENELRNFQNAIATGTKSKRIKAMAMLARYSKHAPEHVLARTIPFLMVILGHNNRSNDSANFSLQMASAYCLKCIACRSDELVTQMGANGAAQLLMNLLPHSDGMFLKVLVKCLLVVVGFCNTSRAVVATGGGLGIIVNKLSSCEDREIRRYLLEILSLLALRRNVRREIVRLDALHYVVEAVGVGSMVSRERACQAIGMFGVTREGRRAVVELGAILPVVELFCSRDHTTKLVAGNTLGVISAYVDCIRSIAQAGAIPLYSELLEGGDPSGKDIAEDAFCVLAGEKFPCIE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00576 302 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 5 294 - -
Aip01g00576 302 PANTHER U BOX DOMAIN-CONTAINING 5 294 - -
Aip01g00576 302 Gene3D - 215 297 IPR011989 -
Aip01g00576 302 Gene3D - 17 214 IPR011989 -
Aip01g00576 302 SUPERFAMILY ARM repeat 25 294 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00576 Aip-Chr1 8626949 8628021 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00576 134 294 U-box Gene Family AT3G46510 27.950 1.26e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00576 - - aip:107645755 565.844