Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00575 ATGCACCTTGCAACTGTTGATGATTTTCTCCTCCAACCGCTTTTCACGCGTTATGTATCTGCTTCGTTGAACCTAATCCTGTTAATTGCGCTTCTTGTGTCACGGATATGGGAGAAAGTTCATGCGAATGTGAACCATAGAGAAAACAACGAAAGAATTCGATTACGTAGTGGTGGATTCTTGTACTTCAAACAAGGTCCACTTTGTAGCTTAGCTATTTGTGTGTTCAACCTTGTGCTGTGCTTGCTAACCTACTTTTACTTGTATAAAAATGATGGTGGTACTGGTTCCTCAAATGAAGTTATTGTTGCAATTTCTGATTTTGCTCTTAGATCACTTGCTTGGGCTGTTGTTTGTGGTTATTTGCAATTTGGAAGCTCCGGTTCTTGGGGACCTTTCCCCTCAAGTTTCTTGAGGATTTGTTGCTGGGTATATGCTGTTGTTTGCTTTTGTTGCATTATAATAGACTTTATAATCTATGAAAAGCAAGCTTTCTTGCCGATTATGTATCTTGTTTCCGATATAAGTGGTTTTATTAGTGCTTTATTTCTGTGTTATTTGGGGTTTTCCGGAAACCATGTTGTTAAGAATGCCCCTCTTGAAGAAGCCCTTTTGAATGATGAATCTTTGGTGAGGAACGGTTGTAATCGCAATGAAACCAGAGGAGATGGAAATTCGTCGAGCTATTACAATGCTGGATTCTTTAGTTTTCTTACATTCTCTTGGTTGAGTCCATTGATATCTCTAGGCAATAACAAGGCTTTAGATATCGAGGATCTTCCTGTTCTTCATATCAATGATAGTGCCTATGGGTCTTTTCCAAATCTTAGAGACAAGCTTGAGTCACAATGTGGTGATGATGGGAAAGTAACCACTTTTAAGTTGGTTAAGGCAATGTTCTTGTCAACATGGCAGCTGATCTTACTGTCAGCCTTATTTGCATTCCTGTACACTTGTGCTTCTTATGTTGGTCCTTATTTGATTGATTTCCTTGTTCAATACCTCAATGGGGAGCAAATGTTTGAAAATGAAGGCTATGTTTTGGTATTGGCATTTGCTGTTGGTAAGTTTGTGGAGTGCCTCTCGCAGAGACATTGGATGTTCAGGTTCCAGCAGATTGGGGTTAGGATACAATCAATGTTGGTGGGGACGATCTATGCTAAAGGTTTGAAGCTTTCGTGTAAATCGAAGGATGCTCATAGTAGCGGAGAAATCGTGAATTTGTTGACTGTTGATGCTTCAAGGGTTGGTGAATTTTGTTGGTACATGCATGATCCATGGGTGGCTGTTTTGCAAGTTGCTTTGGCCTTGTTGATTTTGTATCGGAGTGTTGGGCTTGCTTCGATTGCTGCTTTTGTTGCCACCGTAATTGTGATGTTGCTAAACCTGCCAGTGGCATCATTGCAAGAAAAATACCAAAATAAGTTAATGGAGTTCAAAGACAAACGAATGAAGTCAACATCTGAGATCTTAAAGAATATGAGGATTCTGAAACTGCAAGCTTGGGAGATGAAGTTCTTAGAGAAGATCATTCAGCTTAGGAAGGCTGAGGAGATATGGCTAAAGAAATTTGTCATTGGTTCAGTGATTATTAGATTTCTCTTCTTTAATGCCCCCACTTTTGTTGCTGTGGTAACTTTTGGTACATGTGTTCTTATGGGCATACCACTTGAATCAGGGAAGATCTTATCTGCACTCGCAACTTTCCGAATTCTTCAAATTCCCATATATAGCCTCCCTGACACAATTTCAATGATAGCACAAACTAAGGTCTCACTTGATAGGATCACATCATTTCTTTGTCTAGATGACTTGCAAGCCAATGCAGTAGAGAAACTTCCCCATGGTAGTTCTGATTTAGCAGTTGAATTTATAGATGGAAATTTCTCATGGGATTCCTCTTCCTCTAGTACTACTCTGGCGAACATAAATCTCAAAGTTTTTCATGGCATGAGGGTTGCTGTTTGTGGCACTGTTGGATCTGGCAAGTCAAGTTTACTTTCTTGTGTGATTGGTGAAGTCCCAAAGCTATCTGGGACCATTAAAGTGTGTGGAACAAAGGCTTATGTTTCTCAGTCACCATGGATACAAAGTGGTAAGATAGAAGATAACATACTATTTGGCAAAGAGATGGACAGGGAAAAGTATGAGAAGGTACTAGAAGCATGTTCCTTAACAAAAGACCTCGAGGTTCTATCATTTGGTGACCAGACTATTGTTGGTGAGAAAGGAATCAATTTGAGTGGTGGACAGAAGCAAAGATTACAAATAGCTCGCGCTCTTTACCAAGATGCTGATATATACCTGTTTGATGACCCTTTCAGTGCTGTGGATGCTCATACAGGATCTCATCTTTTTAAGGAGTGTATACTCGGCCTTTTACAAACAAAAACTGTGATATACATTACTCATCAGATAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAAAGATGGAAGGATAACTCAGTCTGGAAAATACAATGACATTCTCAAGTCAGGCACTGATTTTATGGAACTTGTAGGGGCACATCAGGAAGCTTTGTCTTCAATTAAATCTTTAGAGAGAAGGACTTCAAGTAAATCTTTAGAGAGAAGGCTTTCGAGTAAATCTTTTGAGAGAAGTCCCACGTCTAAGACATTAGGTCTCACCGTGGAGGACAGTGATTCACTAAGTTCTTTTGGAGAGCAAGACTTGGAAAACATTGATGAACAAAATGGTAAACCAGATGAAATAGTTGATAAAAGAGGCCAACTTGTTCAAGACGAAGAACGAGAAAAGGGTAGAGTTGAGTTTAAAGTCTACTGGAAATACATGACAACAGCATATGGAGGTGTTCTTGTACCCTTCATATTACTTTCACAAATACTTACTGTAGCTTTGCAAGTTGCGAGTAATTACTGGATGACTTTGGCAACTCCAGTTTCTGCAACTGCAGAACCTGCTGTTGGAAGTGTTACGCTTATGGCTGTCTATGCTGCTTTAGCACTTGGAAGTTCCATTGGCAACCTTGTCAGATCAATGCTTACTGTGATATCTGGATATGTGACTGCAACCATACTCTTCAATAAATTGCATATGTGCCTTTTTCGAGCACCAATGTCATTTTTTGATGCCACCCCAAGTGGGCGAATCCTTAATAGAGCTTCAACAGACCAAAGTGCAATAGATATTAACATTCCAAATATATTATGGGCAGTTACCTACAATCTGGCTTTCGTCTTGGGAAGTATTGCAGTGATGTCTCAAGCTGCATGGCAAGTGTTTATTGTATTTATTCCGGTGGTCGCAGCATGCATTTGGTACCAGCAATACTATTCAGCATCGGCACGGGAATTGGCACGGTTAGTTGGTATATGCCAAGCTCCAGTAATACAACATTTTTCTGAAACCATTTCTGGATCAACAACCATAAGAGCTTTTGAGCAAGAATCAAGATTCGGTGACATAAACATGAAATTGACGGATAGATATTCCCTACCAAAGATGTTTTCTGCTATAGCAATGGAATGGTTGTGTTTCAGATTGGATATTTTATCCTCCATCACATTTGCGTTCTGTTTGATTTTCTTGGTATCTTTTCCAAATGCAATTACTCCTGGCATTGCGGGGTTGGCTGTGACGTATGGGCTCAATTTAAATTCACAAGTGGTTAATATAGTTTGGTTTCTTTGCCAATTGGAGAACAAAATTATATCTGTAGAAAGAATTTTTCAATACACCTCCATCCCAAGTGAACCTCCTCTTGTCATAGAAGACAACCAACCTGATCCTTCATGGCCACCATTCGGGGAGGTTCATATCCAAGATCTACAGGTCAGGTATGCTCCTCACTTACCACTTGTATTGCGTGGACTTACTTGCACTTTCGCTGCTGGAGCAAAAAATGGCATTGTGGGAAGAACTGGAAGCGGAAAAACAACTCTAGTGCAAACACTTTTCCGGCTTGTTGAGCCAGTTGCTGGAAAAATATTGATTGATAGCATCAATATATCTTCAATTGGAATTCATGATTTAAGATCCAAACTAAGCATTATTCCACAGGATCCAACAATGTTTGAAGGGACTATAAGGAACAACTTAGATCCACTGGAAGAATACACAGATGAACAAATTTGGGAGGCTTTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAGAAAGAAGAGAAGCTGGACTCCATAGTTACCGAGAATGGCGAAAATTGGAGTATGGGTCAAAGACAGTTGGTCTGCCTTGGCCGCGTCTTACTAAAGAAAAGCAAGATCCTAGTGCTTGACGAGGCTACGGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACAGTTAAGCAGAATTTTTCAGACTGCACAATAATTACAATTGCTCATAGAATAACTTCAATCCTTGACAGTGACATGGTTCTGTTTCTTAACCAAGGACTTATTGAGGAATATGATTCACCAAAAAAGTTGCTTAAGAACAAATCTTCAGCTCTTGCGCAACTAGTTGAAGAATACACTCGAAGGTCAAACTCTGGTTTTGAAAGTTGA 4545 0.3969 MHLATVDDFLLQPLFTRYVSASLNLILLIALLVSRIWEKVHANVNHRENNERIRLRSGGFLYFKQGPLCSLAICVFNLVLCLLTYFYLYKNDGGTGSSNEVIVAISDFALRSLAWAVVCGYLQFGSSGSWGPFPSSFLRICCWVYAVVCFCCIIIDFIIYEKQAFLPIMYLVSDISGFISALFLCYLGFSGNHVVKNAPLEEALLNDESLVRNGCNRNETRGDGNSSSYYNAGFFSFLTFSWLSPLISLGNNKALDIEDLPVLHINDSAYGSFPNLRDKLESQCGDDGKVTTFKLVKAMFLSTWQLILLSALFAFLYTCASYVGPYLIDFLVQYLNGEQMFENEGYVLVLAFAVGKFVECLSQRHWMFRFQQIGVRIQSMLVGTIYAKGLKLSCKSKDAHSSGEIVNLLTVDASRVGEFCWYMHDPWVAVLQVALALLILYRSVGLASIAAFVATVIVMLLNLPVASLQEKYQNKLMEFKDKRMKSTSEILKNMRILKLQAWEMKFLEKIIQLRKAEEIWLKKFVIGSVIIRFLFFNAPTFVAVVTFGTCVLMGIPLESGKILSALATFRILQIPIYSLPDTISMIAQTKVSLDRITSFLCLDDLQANAVEKLPHGSSDLAVEFIDGNFSWDSSSSSTTLANINLKVFHGMRVAVCGTVGSGKSSLLSCVIGEVPKLSGTIKVCGTKAYVSQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLTKDLEVLSFGDQTIVGEKGINLSGGQKQRLQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECILGLLQTKTVIYITHQIEFLPDADLILVMKDGRITQSGKYNDILKSGTDFMELVGAHQEALSSIKSLERRTSSKSLERRLSSKSFERSPTSKTLGLTVEDSDSLSSFGEQDLENIDEQNGKPDEIVDKRGQLVQDEEREKGRVEFKVYWKYMTTAYGGVLVPFILLSQILTVALQVASNYWMTLATPVSATAEPAVGSVTLMAVYAALALGSSIGNLVRSMLTVISGYVTATILFNKLHMCLFRAPMSFFDATPSGRILNRASTDQSAIDINIPNILWAVTYNLAFVLGSIAVMSQAAWQVFIVFIPVVAACIWYQQYYSASARELARLVGICQAPVIQHFSETISGSTTIRAFEQESRFGDINMKLTDRYSLPKMFSAIAMEWLCFRLDILSSITFAFCLIFLVSFPNAITPGIAGLAVTYGLNLNSQVVNIVWFLCQLENKIISVERIFQYTSIPSEPPLVIEDNQPDPSWPPFGEVHIQDLQVRYAPHLPLVLRGLTCTFAAGAKNGIVGRTGSGKTTLVQTLFRLVEPVAGKILIDSINISSIGIHDLRSKLSIIPQDPTMFEGTIRNNLDPLEEYTDEQIWEALDMCQLGDEVRKKEEKLDSIVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQNFSDCTIITIAHRITSILDSDMVLFLNQGLIEEYDSPKKLLKNKSSALAQLVEEYTRRSNSGFES 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00575 1514 Gene3D - 602 871 IPR027417 -
Aip01g00575 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 845 IPR003439 GO:0005524
Aip01g00575 1514 CDD ABCC_MRP_domain1 622 822 - -
Aip01g00575 1514 CDD ABC_6TM_ABCC_D1 309 596 IPR044746 GO:0140359
Aip01g00575 1514 ProSitePatterns ABC transporters family signature. 747 761 IPR017871 GO:0005524
Aip01g00575 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 198 1513 - -
Aip01g00575 1514 Gene3D - 1251 1504 IPR027417 -
Aip01g00575 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 308 588 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g00575 1514 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 198 1513 - -
Aip01g00575 1514 CDD ABCC_MRP_domain2 1266 1486 - -
Aip01g00575 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 952 1231 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g00575 1514 Pfam ABC transporter 1286 1433 IPR003439 GO:0005524
Aip01g00575 1514 Pfam ABC transporter 640 774 IPR003439 GO:0005524
Aip01g00575 1514 Gene3D ABC transporter type 1, transmembrane domain 282 601 IPR036640 GO:0005524|GO:0016021
Aip01g00575 1514 Gene3D ABC transporter type 1, transmembrane domain 914 1249 IPR036640 GO:0005524|GO:0016021
Aip01g00575 1514 Pfam ABC transporter transmembrane region 308 573 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g00575 1514 Pfam ABC transporter transmembrane region 952 1204 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g00575 1514 SUPERFAMILY ABC transporter transmembrane region 949 1248 IPR036640 GO:0005524|GO:0016021
Aip01g00575 1514 SMART AAA_5 649 822 IPR003593 -
Aip01g00575 1514 SMART AAA_5 1294 1479 IPR003593 -
Aip01g00575 1514 CDD ABC_6TM_ABCC_D2 950 1243 IPR044726 GO:0140359
Aip01g00575 1514 MobiDBLite consensus disorder prediction 875 902 - -
Aip01g00575 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 844 IPR027417 -
Aip01g00575 1514 SUPERFAMILY ABC transporter transmembrane region 301 600 IPR036640 GO:0005524|GO:0016021
Aip01g00575 1514 MobiDBLite consensus disorder prediction 867 914 - -
Aip01g00575 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1268 1502 IPR003439 GO:0005524
Aip01g00575 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1259 1494 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00575 Aip-Chr1 8618378 8626131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00575 622 883 Calmodulin-binding Proteins AT2G36910 28.671 1.19e-25 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00575 - K05666 gmx:106794105 2190.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00575 01 8618378 8626131 Aip01g00575 01 8618378 8626131 ECH