Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00567 ATGGATCCTCGACCAATTACACGATGTGGGTGTGGTGCACAAATAAAGGTTCACGTTGATCAAAGCACTGGCCGTTGGTTCGTAGATAAGTTTTGTGGTGAACATAACCATGAGATGCTAGATGCAAGGTTTCGGGGGTTGTTGCGTTCTCATAGGGTAATCAAGGAAGGGGACATGCATCAAATTAACTCGATGAGAAAAGCTGAGATGCGTGTGCCAACCATATTTCGTGCATTTGTCACCCAATGCGGGGGATTTGAGACAGTTGGATTTGAAATTAAAGACATCTACAATGCAATAGAGAATGAAAGAAGAGTGGGGGCAAGTGATGCGGAGTGTGCCTTAAAGTATTTGTGTTGCCTAAAGAGGAATGACGCAAACATGTTTTGGAAATTCTCATTGGACGAGGAGAGGAGGCTGCACAATATATTTTGGTGTGATGGTACTAGCCGACATGACTATAGTGTGTTTGGGGATGTTCTGGGGTTCGACGCAACTTATGGGAGGAATAGGTACAAGTGTCTGCTTGTAATATTTTTGGGTTTGGATCATCACATGCAGACTGTGGTATTCAGTTGTGCAATTCTGAGCAACGAAGTAGAGGAAAGTTATGTCTGGTTGTTGCGAGTATTTCTTGAGGCAATGAAAGGACAAGAACCGAAATCTATGTTGACCGATGGAGATTTGGCAATGAAGAATGCAATTAATGCTGTCTTTCCAAATGCACATCACAGGCTGTGCAGTTGGCACCTGCTACGAAATGCGACTGCCCGCATTGGCCGGCCCATGTTTCTTTGCAAGTTCCGAGTTTGCCTGATGGGTGACTTAGAGGTAGATGAGTTTGAGAACCTATGGAGCGATGTTGTGGAAGAGTTTGGGTTGCAACAAAACCTGTGGATACTAGATATGTATGAACGCAAGCATATGTGGGCTAATGCGTATATTAGAGGCAAATTTTTTGCTGGGCTGAAGACGATGTCTCGATATGAGGCATTGAACATGCAAATTGGGAAATTTATTGGGAACGGATACAATCTACGTGAATTTATTGAGCATTTTCAGCACTATCTCAAGTTCATGAGAAGAAGAGAGCTAGTCGCCGATTATAGATCTGTGTATGGGCAACCCATTGTTAAGTCGAAGTTGGAGGCCTTGGAAAGCTACGCAGCAACAGTATACACCAAAGAGGTTTTTGAACTATTCCGGGAGGTCCTCCTTTTGTCCAGCAATGTAAGAGTTGTATCTTGCAAGAAAACTAGCACGTGTTCCCTGTTTGAGGTTACCATGTACTGCCGGGACCAGTCCTGGAGTGTGGCTTGGGACGAGGCGGATGACGAATTTACTTGCTCATGTTTGCGTATGGAATCATTTGGCATTCCTTGTGTGCACATGAAGGCCAAGCAAGCAGCAGTGGACCCATCTGGACAGGTAGACGAGATTCCTGATGCTGTGTATATGAGCATGCACGCAGCTTTGCTAAATGATTGTAGAGAGTTAATCAAGTTAGCCTGCCAGTACTTTGAAGACTACTCTGAACTGAAATCCATGATACAAAACCAAAGTAATGCGTTGAGAGAGAAGCATCGGTTAAGGGTTGGCATAGTTGATTGCGGAGAAAAGGAAGTATGCGGAGTTCGGAAGCGAAAGGCGCAGGGGCATGGCCGCAGCGATGGAGGGTTGGGAGAACACGTTATTGTATGGCTGCTAGCTTGTTGA 1716 0.4493 MDPRPITRCGCGAQIKVHVDQSTGRWFVDKFCGEHNHEMLDARFRGLLRSHRVIKEGDMHQINSMRKAEMRVPTIFRAFVTQCGGFETVGFEIKDIYNAIENERRVGASDAECALKYLCCLKRNDANMFWKFSLDEERRLHNIFWCDGTSRHDYSVFGDVLGFDATYGRNRYKCLLVIFLGLDHHMQTVVFSCAILSNEVEESYVWLLRVFLEAMKGQEPKSMLTDGDLAMKNAINAVFPNAHHRLCSWHLLRNATARIGRPMFLCKFRVCLMGDLEVDEFENLWSDVVEEFGLQQNLWILDMYERKHMWANAYIRGKFFAGLKTMSRYEALNMQIGKFIGNGYNLREFIEHFQHYLKFMRRRELVADYRSVYGQPIVKSKLEALESYAATVYTKEVFELFREVLLLSSNVRVVSCKKTSTCSLFEVTMYCRDQSWSVAWDEADDEFTCSCLRMESFGIPCVHMKAKQAAVDPSGQVDEIPDAVYMSMHAALLNDCRELIKLACQYFEDYSELKSMIQNQSNALREKHRLRVGIVDCGEKEVCGVRKRKAQGHGRSDGGLGEHVIVWLLAC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00567 571 PANTHER OS02G0262500 PROTEIN 2 494 - -
Aip01g00567 571 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Aip01g00567 571 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 494 IPR031052 GO:0006355
Aip01g00567 571 Pfam MULE transposase domain 160 254 IPR018289 -
Aip01g00567 571 ProSiteProfiles Zinc finger SWIM-type profile. 436 472 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00567 Aip-Chr1 8477137 8479045 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g00567 MULE 2.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00567 - - adu:107488338 800.045