Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00560 ATGGAGTTTGTTCTCCACTATCTTTCTTCAAATTCCACCTTGTCCTTCTTTCTTTTCTTGTTCACGGTGGTGTTTATCATATTTTCAAGATCAAAACCGAAGCCACAAAACTCAAAATTGCCACCAGGACCATCTAAACTACCCTTCATAGGAAACATACACCAACTTAGTTCTATGCCTCACCGTGGCCTAACAAAATTAGCACAAGAATATGGCCCTCTTATGCACATAAAACTAGGCTCACTCTCAACCATAGTTGTTTCTTCACCTGAAATGGCCAAAGAAGTTATGAGAACACATGACATAATATTTGCAAATAGGCCTCACAATCTAGCTATTGATGTTATAACATATGGTTCTAAGGGAATGAGTTTTTCACCTTATGGAAGCTATTGGAGGCAGATGAGGAAGATTTGTACTTTTGAGCTATTAACACCGAAGCGAGTTGAATCGTTTCGATCAATCAGGGAACAAGAAGCATCGAATCTTGTTAAGGATTTAAGTTCCAATCATGGGTCTATCATTAATTTCAGCAACGTTATATATTCTGTGTCATATGGATTAACATCAAGAGTGGCCTTTGGGGAAAAGTCAACGGATCAAGAAGCGTTCATACAAGTTATGAAGGATGTGTTGAAAGTTGTTTCTGGTTTCTCTTTGGCTGATTTGTATCCTTCAATTGGAATGCTTAGTGTTGTGACAGGGTTAAGATCAAAAGCAGAGAGGATTCATCAAGAAGTGGATAGGATCCTTGAGAAGATTGTGAGAAATCACAAGGAAAGAAAGGAAATGAATGAAAAGTCAACGGAGGATATTGTTGATGTCTTATTAAAGCTTCAGAAGCATAGCAACCTTGAGCACCCTCTATCTGACAATGTTATCAAAGCAACAATTTTGGACATCTTTGCTGCCGGAAGCGGCACCTCAGCGAAAACATTAGAGTGGTCGATGTCAGAACTTATCAAGAACCCAAGCGTGATGGAAAGAGCACAAGCTGAGGTAAGAAGAGTCTTTGATTCAAGAGGGTGTGTCGACGAAGCCAACCTCCATGAACTCCACTACTTAAAATCAGTAATCAAAGAAACACTACGCCTCCATGCTCCTGTTCCTTTATTACTGCCAAGAGAATGCAGCGAGAGATGCGAAATCAATGGTTATGAAATCCCGGCTAAGAGCAGGGTCGTTGTTAATGCTTGGGGAATTGGGAGGGACCCAAGATACTGGAAGGAAGCTGAGAAGTTTGATCCAGAAAGGTTCATTGATGGTTCTGTTGATTTCAAAGGTGCAGATTTTGAGTTCATTCCATTTGGTGCTGGGAGAAGGATTTGTCCTGGAATCACATTTGGGGTTGCTAGTGTTGAACTCATACTTGCAAATTTGCTTTTTCATTTTGATTGGAAGCTTCCAAATGGCGAGAAGCATGAAGATCTTGACATGTCTGAATCATTTGGATTGTCCATCAGAAGAAAACATGATTTGTACCTGATTCCTTCTGTGTATCATTACTCTTCTGCTAATTAG 1521 0.3997 MEFVLHYLSSNSTLSFFLFLFTVVFIIFSRSKPKPQNSKLPPGPSKLPFIGNIHQLSSMPHRGLTKLAQEYGPLMHIKLGSLSTIVVSSPEMAKEVMRTHDIIFANRPHNLAIDVITYGSKGMSFSPYGSYWRQMRKICTFELLTPKRVESFRSIREQEASNLVKDLSSNHGSIINFSNVIYSVSYGLTSRVAFGEKSTDQEAFIQVMKDVLKVVSGFSLADLYPSIGMLSVVTGLRSKAERIHQEVDRILEKIVRNHKERKEMNEKSTEDIVDVLLKLQKHSNLEHPLSDNVIKATILDIFAAGSGTSAKTLEWSMSELIKNPSVMERAQAEVRRVFDSRGCVDEANLHELHYLKSVIKETLRLHAPVPLLLPRECSERCEINGYEIPAKSRVVVNAWGIGRDPRYWKEAEKFDPERFIDGSVDFKGADFEFIPFGAGRRICPGITFGVASVELILANLLFHFDWKLPNGEKHEDLDMSESFGLSIRRKHDLYLIPSVYHYSSAN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00560 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Aip01g00560 506 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 Pfam Cytochrome P450 41 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 SUPERFAMILY Cytochrome P450 39 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00560 506 PANTHER CYTOCHROME P450 71B11-RELATED 9 501 - -
Aip01g00560 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 501 - -
Aip01g00560 506 Gene3D Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00560 Aip-Chr1 8384931 8387016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00560 17 503 Cytochrome P450 AT5G25120 41.935 7.63e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00560 - - gmx:100818000 763.066