Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00559 ATGTCACGTTTTCACTATGCATGTGCTTTTTCACTAATGAACCTTATCTTTCTTAAACCAATGGCCATTTTCTCTTCTCTTCCAACAATGGATTCTCCACTCCCTGCTATTAGCTTTACATCAATGATTATCTCCCTTCTCCTTTTCATGATCATGGCATACAAAATAATGATGAAAAACCCTAACAATAAATCTCTCAAGTTACCACCAGGGCCAAACAAGCTACCAATAATTGGGAACATACACAACCTTTTTGGCTCACCACTTCCCCACCATACATTGAGAGATTTATCCACAAAATATGGACCCTTGATGCATCTTAAGCTAGGTGAAGTTTCAACTATAGTGGTGTCTTCACCTGAATATGCCAAGGAGTTCTTGAAAACCCATGATCTAAATTTTTCATCAAGAACTCCTATTCTAGCTTCAAAGATAATGTCCTATGGTTCTAAGGGTTTATCTTTTTCACCATATGGTGATTATTATAGACACTTAAGAAAGATTTGTGTGTTGGAGCTTTTAAGCTCTAAACGTGTCCAATCTTTCCAACCAATCAGAGTTGAAGAGCTCAACAATCTCATCAAATTGATTGCTTCAAAAGAAGGGTCGCCTATCAATCTTTCCAAAGAAGTGTTCTCAACAATATCTACTATTGCTTCAAGGTCTGCTTATGGCACCAAGTGCAGGTACCACAAGGAATTCATATCAGTTGTTAGAGAAGCTACATTGATTTCAGGAGGTTTTGAGATTGGAGATTTGTACCCTTCTATTACATGGCTTCAATATGTCTCTGGGTTGAAGCCCAAGCTTGAGAAATTGCACCGAGAAGCTGATCACATAATGCAAAACATTTTCAGTGACCATAGAGAGATGAAAGCATCAAGGAACACACAAGAACAGAGTGATGATGTAGAAGCAAATGAGTACCTCTTGGATGTGCTCTTCAAATTCCAGGATAGTAGTAATCAGCAAGAGTTTCAATTAACAGATGATAGTATCAAGGCTGTGATACTGGACATTTTTGCAGCCGGAACAGAGACATCAGCTACAACCGTATTGTGGGCAATGGCAGAGATGATTAAGAATCCATTGATAATGAAGAAGGCACAAGCTGAAGTAAGACAAGTACTTGACAAAGAAGGAATAAATGGCATTGAAAAACTAAAATACTTGAAATCAGTTGTGAAAGAGACACTGAGATTGCACCCTCCTGGTGCATTTTTACTTCCCAGAGAATGTGGACAAGATTGCGAGATCAATGGATATCACATACCTTCCAAAAGCAAAGTAATAATCAATGCTTGGGCGATTGGGAGAGACCCAAATCATTGGGTTGAGCCTGAAAGGTTCAACCCTGAAAGGTTCATGAATAGCACTATTGATTACATAGGAAACAACTTGGAATTCATTCCTTTTGGTGCCGGAAGAAGAATGTGCCCAGGAATCACGTTTGGGGTGGCGAGCACTGAGTCTACACTTGCAATGTTGTTGTATCATTTTGATTGGAAGCTTCCCGATGGAATGAAGATTCAGGACTTGGATATGTCGGAAATTTTTGGAGTGGCAGTAATGAGAAAAGAAAATCTATGCCTTGTTCCCATTACTTCTCGTCCTATATGCAACTGA 1626 0.3911 MSRFHYACAFSLMNLIFLKPMAIFSSLPTMDSPLPAISFTSMIISLLLFMIMAYKIMMKNPNNKSLKLPPGPNKLPIIGNIHNLFGSPLPHHTLRDLSTKYGPLMHLKLGEVSTIVVSSPEYAKEFLKTHDLNFSSRTPILASKIMSYGSKGLSFSPYGDYYRHLRKICVLELLSSKRVQSFQPIRVEELNNLIKLIASKEGSPINLSKEVFSTISTIASRSAYGTKCRYHKEFISVVREATLISGGFEIGDLYPSITWLQYVSGLKPKLEKLHREADHIMQNIFSDHREMKASRNTQEQSDDVEANEYLLDVLFKFQDSSNQQEFQLTDDSIKAVILDIFAAGTETSATTVLWAMAEMIKNPLIMKKAQAEVRQVLDKEGINGIEKLKYLKSVVKETLRLHPPGAFLLPRECGQDCEINGYHIPSKSKVIINAWAIGRDPNHWVEPERFNPERFMNSTIDYIGNNLEFIPFGAGRRMCPGITFGVASTESTLAMLLYHFDWKLPDGMKIQDLDMSEIFGVAVMRKENLCLVPITSRPICN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00559 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Aip01g00559 541 SUPERFAMILY Cytochrome P450 69 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 Pfam Cytochrome P450 69 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 122 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PANTHER CYTOCHROME P450 71B11-RELATED 40 535 - -
Aip01g00559 541 PANTHER CYTOCHROME P450 71D9 40 535 - -
Aip01g00559 541 Gene3D Cytochrome P450 61 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00559 541 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00559 Aip-Chr1 8373791 8378336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00559 40 533 Cytochrome P450 AT3G26300 42.012 1.24e-132 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00559 - K13267 gmx:100813216 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00559 01 8373791 8378336 Aip01g00559 01 8373791 8378336 ECH