Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00513 ATGGTAAAGCAATTGGGCTCTCTGAGGATCATAAGCCAAACAGAATTGATGAACGGAAGAGAATTGAGTCAGCAGGACCAGGAGATAGATGAACAAACTAAGTTGCTGATTCTTGCAAGTGATGGACTTTGGGATGTAGTACCAAATGATGATGCCATTGCCCTTGCTTGCACAGAAGAGGAGCCTGAGGCAGCTGCTCGTAAGTTAACAGAAGCAGCATTTTCTCGTGGCAGTGCAGGTAACATTACATGCATTGTGGTGCGCTTCCATCATGACAAAGCAGAACCCATTGGTACTGACAAAGTAGACGTCGTTGTTCCTGAAAAAGTAGATACGCTGAATTTGTGA 348 0.4454 MVKQLGSLRIISQTELMNGRELSQQDQEIDEQTKLLILASDGLWDVVPNDDAIALACTEEEPEAAARKLTEAAFSRGSAGNITCIVVRFHHDKAEPIGTDKVDVVVPEKVDTLNL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00513 115 PANTHER ALPHABET, ISOFORM E-RELATED 22 95 - -
Aip01g00513 115 SUPERFAMILY PP2C-like 27 90 IPR036457 -
Aip01g00513 115 Pfam Protein phosphatase 2C 26 82 IPR001932 -
Aip01g00513 115 ProSiteProfiles PPM-type phosphatase domain profile. 1 89 IPR001932 -
Aip01g00513 115 Gene3D - 20 109 IPR036457 -
Aip01g00513 115 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 22 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00513 Aip-Chr1 7257363 7257792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00513 25 95 PP2C-type Phosphatase Gene Family AT5G53140 77.465 4.18e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00513 K17506 - gmx:100805795 127.487