Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00504 ATGCCTGAAAGCTTAAGGAATCTTTCACTTTCTCCCAAAATCTTCTTCTTCACCTTGCTTCTTTCATTAAACATCATTCTCCTCTTTCCATGTTGTTGTTTCTCACTTAATGAACAAGGCCAAGCTCTTTTATCATGGAAGAACAGTTTAAACAGCACTTCAGATTCATTAGCATCATGGAACAATTCTACTTCAACACCATGCAACTTTTTTGGTGTTCGTTGCAACTCACAAGGGGATGTTGTCCAAATAAATTTGAAATCAGTGAACTTGGAAGGTTCATTGGTACCTTCAAATTTTCAACCATTAAGGTCACTGAAGATTCTTATCCTCTCATCAACAAACATCACAGGAAGGATCCCAAAGGAGATTGGAGACTACCAAGAACTCATGTTTCTTGATCTTAGTGGCAATTCTCTATTTGGTGAAATCCCAGAAGAGATTTATAGGCTAAGAAAACTAGTTAGTTTGTCCCTTCACAGAAACTCACTTGAAGGAAACATTCCATTCAGCATTGGGAATCTATCAAGCCTTGTGAACTTGACACTCTATGATAATCATCTCAGTGGTGTGATTCCAAAGAGCATTGGATCCTTAACCAAGCTTCAAGTGTTTAGAGCTGGTGGCAACAAGAATCTTAAGGGTGAGCTTCCATGGGAGATTGGAAACTGCACCAACTTGGTCATGTTAGGTCTTGCAGAAACCAGCATTTCTGGGAGAATCCCTTCATCAATTGGAATGCTGAAAAGGATTCAAACTATGGCAATTTACACAACACTATTGTCAGGTCCTATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACATTTACTTGTACCAGAACTCTCTCTCAGATTCAATCCCAAACCAAATTGGAGAACTCAGCAAGCTTCAGAATCTTCTTTTATGGCAGAACAACATAGTTGGTACAATCCCAGAAGACCTTGGAAGATGCAGAGAGATCAAGGTCATAGATTTCTCCGAAAACCTTCTGACAGGTAACATTCCAAGGAGTTTTGGTCAGCTTTCTAATCTTGAAGAGCTTCAGCTTAGTGTCAACCAGGTCTCAGGCTCCATACCTCCTGAAATCTCAAACTGCACCTCTCTGGTTCAGCTGCAGCTCGACAACAACGCTCTCTCCGGCGAGATTCCGGCACGCATCGGCGACTTGAGAAGCCTAACTCTGTTCTATGCTTGGCAGAACAATCTAACAGGAAAACTCCCAGATAGTCTTTCTGAGTGCCAAGAACTTGAGGCACTTGATCTTTCATACAACAATTTGATAGGTCCAATTCCAAACCAACTATTCGAATTGAAAAATCTCACCAAACTCTTGCTTCTTGCAAATGATTTATCCGGCGTTATCCCGCCGGATATAGGTAACTGCACTAGCCTATACCGGCTCCGGTTGAATCACAATAGACTAGCAGGTAACATTCCACAAAAGATTGGAAACTTAAAAAATCTGAATTTCTTGGATTTGAGCAACAACCATCTCACTGGGGACTTTCCTCAAACACTTGGTGGGTGCCAGAACCTTGAGTTCTTGGATCTTCATTCAAACAGCATCACAGGTTCTGTTCCTGATTCTCTTCCCAAAAGCCTTCAATTAATTGACATATCAGATAACATGCTTTCAGGATCATTGACTCATTCCATTGGTTCACTGAATGAATTAACAAAACTCTACCTTGGAAAGAACCAAATCAATGGAAGAATACCTTCAGAGATTCTCTCTTGTTCCAAGCTACAACTTCTTGATCTAGGAAGCAACAGTTTCTCAGGGGAAATCCCAAAAGAACTTGGCCTACTTTCTTCGCTCGAAATCTCGCTGAATCTCAGCCATAACCGACTCTCCGGCGAGATTCCGACCGAGTTTTCGAGCCTGGGAAAGCTAGGAGTACTTGATCTCTCACACAACAATCTCACAGGGAACTTAGATGCTCTTTCTAGCCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATGGCTTCTCTGGTGAATTACCAAACACACCATTCTTCCATAAGCTCCCTCTCCATGATCTCGCCGAAAATCAAGGTCTCTATCTTTCTGGAACTGCTATAAACTCTTCTTTGAAAACAGAGTCAAAGAGTCACAAAAAATCAGTTATGAAGTTTGTTATGTCAATTCTCCTAAGCACCAGTGCTGCACTGGTGCTGCTAACGGTCTGCGTCCTGGTTCGTTCACGATTGAACGAATCACGGATGCAGGCCGATAGCTGGGAATTGACATTATATCAAAAATTTGAAATATCCATTGATGAAATTGTCTTGAATTTGACCTCATCGAATGTGATTGGAACCGGAAGCTCTGGAGTGGTGTACAAGGTATTGATTCCCAACGGCGAAATACTAGCCGTTAAGAAGATGTGGTTGTCCACGTCATCGGAAGAATCTAGAGCATTTGATAACGAGATTCGAACACTTGGATCAATTAGGCACAAGAATATCATAAGGCTTCTTGGTTGGGGATCCAACAGGAACTTGAAACTCCTTTTCTATGATTATCTCCCTAATGGAAGTTTGAGTTCTTTGCTTCATGGTTCGGGGAAGGGAAAAGCTGAATGGGAAACAAGATATGACGTTGTGTTGGGTGTGGCTCATGCACTTTCATATTTGCACCATGATTGTGTTCCTTCTATAATCCATGGAGATGTTAAGGCCATGAATGTCTTGTTAGGACCTGGATTTCAACCTTACCTTGCTGATTTTGGTCTTGCAAGAATTGCTACTGATACTGAAAATTCTATGCAAAGACACTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAACCAATAACTGAAAAGAGTGATGTATACAGTTTCGGAATGGTTCTACTTGAGGTTCTAACAGGAAGGCACCCATTAGACCCAACCCTACCAATGGGTGCACCCTTGGTCCAATGGGTTAGGAACCACTTAGCCAACAAAGGTGACCCATCAGACATCCTTGACTCAAAGCTCAAAGGGAGATCTGACCCTACCATGCATGAGATGCTACAAACTTTGGCAGTGTCATTTCTATGTGTTAGCACAAGAGCAAATGATAGGCCAACAATGAAGGATGTTGTTGCAATGTTAAAGGAAATTAGGCCTATTGAAACATCAAGGCCTGATTATGATGTGCTGAAGAATAAAGGAGGTTTGAGCTTAGCATCACATAGTTCTTCACCAATTAGACCACCATCACCATCACCATCACCATCACCATCACTACCTCCTAGGAATGCTGTTGTTTCTCATGGATCTTCTAATTGTTCCTATAATTTCTCTGATGAGTCAAACAGTTAA 3339 0.4154 MPESLRNLSLSPKIFFFTLLLSLNIILLFPCCCFSLNEQGQALLSWKNSLNSTSDSLASWNNSTSTPCNFFGVRCNSQGDVVQINLKSVNLEGSLVPSNFQPLRSLKILILSSTNITGRIPKEIGDYQELMFLDLSGNSLFGEIPEEIYRLRKLVSLSLHRNSLEGNIPFSIGNLSSLVNLTLYDNHLSGVIPKSIGSLTKLQVFRAGGNKNLKGELPWEIGNCTNLVMLGLAETSISGRIPSSIGMLKRIQTMAIYTTLLSGPIPEEIGNCSELQNIYLYQNSLSDSIPNQIGELSKLQNLLLWQNNIVGTIPEDLGRCREIKVIDFSENLLTGNIPRSFGQLSNLEELQLSVNQVSGSIPPEISNCTSLVQLQLDNNALSGEIPARIGDLRSLTLFYAWQNNLTGKLPDSLSECQELEALDLSYNNLIGPIPNQLFELKNLTKLLLLANDLSGVIPPDIGNCTSLYRLRLNHNRLAGNIPQKIGNLKNLNFLDLSNNHLTGDFPQTLGGCQNLEFLDLHSNSITGSVPDSLPKSLQLIDISDNMLSGSLTHSIGSLNELTKLYLGKNQINGRIPSEILSCSKLQLLDLGSNSFSGEIPKELGLLSSLEISLNLSHNRLSGEIPTEFSSLGKLGVLDLSHNNLTGNLDALSSLQNLVSLNVSFNGFSGELPNTPFFHKLPLHDLAENQGLYLSGTAINSSLKTESKSHKKSVMKFVMSILLSTSAALVLLTVCVLVRSRLNESRMQADSWELTLYQKFEISIDEIVLNLTSSNVIGTGSSGVVYKVLIPNGEILAVKKMWLSTSSEESRAFDNEIRTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVVLGVAHALSYLHHDCVPSIIHGDVKAMNVLLGPGFQPYLADFGLARIATDTENSMQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPMGAPLVQWVRNHLANKGDPSDILDSKLKGRSDPTMHEMLQTLAVSFLCVSTRANDRPTMKDVVAMLKEIRPIETSRPDYDVLKNKGGLSLASHSSSPIRPPSPSPSPSPSLPPRNAVVSHGSSNCSYNFSDESNS 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00504 1112 Gene3D Ribonuclease Inhibitor 196 336 IPR032675 -
Aip01g00504 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1059 - -
Aip01g00504 1112 Gene3D Ribonuclease Inhibitor 535 723 IPR032675 -
Aip01g00504 1112 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Aip01g00504 1112 SUPERFAMILY RNI-like 291 659 - -
Aip01g00504 1112 Gene3D Ribonuclease Inhibitor 433 534 IPR032675 -
Aip01g00504 1112 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
Aip01g00504 1112 ProSiteProfiles Protein kinase domain profile. 770 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00504 1112 SUPERFAMILY Protein kinase-like (PK-like) 769 1079 IPR011009 -
Aip01g00504 1112 SMART LRR_typ_2 151 175 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 440 464 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 103 127 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 631 654 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 606 630 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 296 320 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 558 582 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 344 368 IPR003591 -
Aip01g00504 1112 SMART LRR_typ_2 488 512 IPR003591 -
Aip01g00504 1112 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Aip01g00504 1112 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Aip01g00504 1112 Pfam Leucine rich repeat 466 525 IPR001611 GO:0005515
Aip01g00504 1112 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Aip01g00504 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Aip01g00504 1112 MobiDBLite consensus disorder prediction 1075 1089 - -
Aip01g00504 1112 SUPERFAMILY L domain-like 34 318 - -
Aip01g00504 1112 MobiDBLite consensus disorder prediction 1054 1112 - -
Aip01g00504 1112 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1059 - -
Aip01g00504 1112 MobiDBLite consensus disorder prediction 1090 1112 - -
Aip01g00504 1112 Gene3D Transferase(Phosphotransferase) domain 1 847 1060 - -
Aip01g00504 1112 Gene3D Ribonuclease Inhibitor 337 432 IPR032675 -
Aip01g00504 1112 Pfam Protein kinase domain 773 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00504 1112 PRINTS Leucine-rich repeat signature 491 504 - -
Aip01g00504 1112 PRINTS Leucine-rich repeat signature 631 644 - -
Aip01g00504 1112 Gene3D Phosphorylase Kinase; domain 1 735 846 - -
Aip01g00504 1112 SMART serkin_6 770 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00504 Aip-Chr1 7032150 7036630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00504 33 1110 Receptor kinase-like Gene Family AT5G56040 64.187 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip01g00504 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00504 - - gmx:100802880 1661.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00504 01 7032150 7036630 Aip01g00504 01 7032150 7036630 ECH