Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00503 ATGCCACAAGAGAGCTTCCATAATCCATTTTTCACTTCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTTCCTAACAACAACAACAACAATAATAATAATAATGAAGCTTCTTCAAAGAATGCCATAGCAATATTAGAGGAAAGTTTCAATGATCATGAATTGGCTCAAAGAAAGGCAGAGGAAGCAGCTTCAAGGAGAAACGAAGCATCAGAATGGGTTAGAGAAATGGATGAAGCAGCAAAAGCATTGCTCCCAAAAGAACCTTCAGAAGAAGAATTCCGCAATGCGCTTCGGAATGGACTCATTCTTTGCAATCTCCTCAACAAAGTCCACCCTCGTGCTGTTTACAAAGTGGTGGAGAATGGTGGGGTTGCGGTGCCAAGCGCAGAGGGCGCAGCCCACTCTGCAATTCAATATTTTGAGAATGTCAGAAACTTTTTGGAGGCTGTCAAAGATATGCAGCTTCTCACTTTTGAAGCTTCTGATTTGGAGAAGGGTGGTTCTTCAAACAAAGTAGTAGACTGCATTCTATGTTTGAAAGGGTACCATGAATGGAAGTTATCCGGTGGAGAGGGAGTATGGAAGTATGGTGGGACTGTGAGAATTACTTCATTTCCAAAGAGGTCTTCTCCTTCTTCATTATCCACAATTGGAAGTGATCAAAGTAGTGCTGATGATCAATCATTGTTGGATGAACAAATAGAGGCATCACAATATGAACACTTGTTAGAATTTCTTCAACTTTCTCAAGAGTTGTTGATTCAAGAAGCAAGAACTGCAAACACACTCTCTTTCCTTTTTGATCACTTTGGACTCAGGCTTCTTCAGGCATACCTTAGAGAAACTGATCACATTCAAGATCTGCCTTTCAATGCAATGGTAATTGATACCCTTCTTAGCAAGGTAGTCAAAGATTTCTCATCCTTGCTTACTTCCCAAGGCACTCAGCTTGGACTTTTCCTGAAGAAGATACTGAAAGGTGATATTGGATGCCTATCAAAGAGAGAGTTCATAGAAGCTATCTCACTATATCTTAATCAAAGAAGTAATTTAGCATCAAATGATTTCTCCAAATTCTGCATTTGTGGTGGTAAACGTGAAAATATTCGGCATAACAATAATAATAATGGCAATTATTCCTCCAAGCATATTGAAGTAATCAATAATCAACAGAAGCAACTTGAGGAAATGAAATACTTTCTTGAAGAGACAAAAATGGAGGTCAAACAAATTCAGTCAGAATGGGAGCAAGAAAGTAGTAGGCTAGAGGAACATATCAAGAGTCTTGAAGTGGGCTCCTCTTCCTATCAGAAAGTTTTGGAGGAGAATCGTAATCTTTATAATCAAATACAAGACCTCAAAGGAACCATTAGGGTGTATTGTAGAGTGAGGCCATTCTTACAAGGACAATCAAATGGAGAGTGTACAGTAGATTATATTGGAGAAAATGGAGACATGATGATTGTGAACCCCCTTAAGCAAGGCAAAGATTCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAACCATAACACAAGAGCAAATATATGGTGACACTCAACCACTAGTGAGGTCTGTTTTAGATGGTTATAACGTGTGCATATTTGCATATGGACAGACTGGCTCAGGAAAGACCTATACAatgAGTGGTCCTGATCTGACAAATGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTGATATATCGAAGGAAAGAACAAATGCCATAAAATATGAAGTTTATGTTCAGATGATTGAGATATACAATGAACAAGTCAGAGACTTGTTAGTCATTGATGCCTCTAATAGAAGATTAGATATACGAAACAACTCTCAACTAAATGGTCTAAATGTCCCTGATGCATTCATAGTTCCAGTCACTTGTACCCAAGATGTTCTTGATTTGATGAGAATCGGTCAGAAGAACCGCGCCGTGGGCGCTACTGCGTTAAACCTTCGAAGCAGCCGTTCTCACAGTGTTCTAACCGTTCATGTTAGAGGGGTGGAACTGGTTTCGAATTCGATTCTTCGTGGTTGTCTCCACCTAGTTGATCTGGCCGGAAGTGAAAGAGTTGATAAATCTGAAGCTGTTGGTGAAAGACTAAAAGAGGCTCAATATATAAATAGGTCACTCTCTGCACTTGGAGATGTTATCTCTGCTCTTGCACAAAAAAGTCCTCATATTCCTTATAGAAATAGCAAGCTCACACAAGTCTTACAAGATTCTTTAGGTGGGCATGCAAAAACTTTGATGTTTGTTCACATAAGTCCTGAGGTTAATGCAATTGGGGAGACACTTAGCACACTCAAGTTTGCTGAAAGGGTTGCATCCATTTCACTTGGTGCTGCTCAAACTAACAAAGAAACTGGAGAGATCCGACAACTAAAGGAAGAGATTGCAGGTCTGAAGTTGGCATTAGAAAGGAAGGAAACAGAACTTGAACAATGGAAGAATGGGAATAACTCTAGAAATGCCATTGAATCACAGAAAGGAAGAGCTATTTCACCTTATCGCTTGCCCAAATATGGAAACAGTAGTGCCACCACCATGAAATCAGAGACTTGTCAGAGACCAACACCAACAGATGATAAAACTTTTGAGGGGAGGAGTTGCTCATCGGGCAAGCAAAGAAGGTCAAGGTTCCCTTCAGCATTGGATTCACCAATGGCAAAAATGGAAAATATTAATTCCCATAAAGGAAGATCTCCATCACCTCCAGTTATAAGGAGATCACAATCCACAGAAAGAGGTTCATCAGTCATTAAAATCAAGGTCAAAATCGACACAGCAGATAACAATAACAATAATAACCACCAAACCCAACCAATCATCAAGCATCCATTCCCATCTAGTAGGAAACTTCATCAAGAAATTAACGAAGAAGAACAATTCAAGCAAGCACTTAGTGTAGTAAGGCAAGGTGGTATTAGAAAAATCACTAAGGTTGATGGTAACAATAATAATAATTATTATTATAATAAGGGTAAGGCTAAGAATAATAATTGTCAATTATTATCACCCTTTAAGATTAATCAAAAGCATGATATGGTGATGCCTACTACTACATTTGGTGAAATTGCTTTGGAGTCACCAAGAACAAGTGATTATTCAGATCAGTCAGAAAATAGCCTTGGCTTTACCGAATCTGTTACAGATTGTGGCGCTTTAAATCTAACCAAGATGCATGATAACTTTCCAAGGACTTCTCATAATCTTTTTGGTTCAAGAGGAATGGTGCAAGGAGGAGAACCATTATCAGCTAGCAGAGTTGAGAACAAATTTTTGAGTGGTTCAGGAGGTAGTAATACTAAAGAATCAAGTAAGACAGTAACCATGCCTGAATTTAGAAGGAGCAGATCTACCCCACGTGGAAAGTTTCTTGGTTTATCATGA 3411 0.3893 MPQESFHNPFFTSPSKRGLKGLVPNNNNNNNNNNEASSKNAIAILEESFNDHELAQRKAEEAASRRNEASEWVREMDEAAKALLPKEPSEEEFRNALRNGLILCNLLNKVHPRAVYKVVENGGVAVPSAEGAAHSAIQYFENVRNFLEAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYHEWKLSGGEGVWKYGGTVRITSFPKRSSPSSLSTIGSDQSSADDQSLLDEQIEASQYEHLLEFLQLSQELLIQEARTANTLSFLFDHFGLRLLQAYLRETDHIQDLPFNAMVIDTLLSKVVKDFSSLLTSQGTQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSNLASNDFSKFCICGGKRENIRHNNNNNGNYSSKHIEVINNQQKQLEEMKYFLEETKMEVKQIQSEWEQESSRLEEHIKSLEVGSSSYQKVLEENRNLYNQIQDLKGTIRVYCRVRPFLQGQSNGECTVDYIGENGDMMIVNPLKQGKDSRRVFSFNKVFGTTITQEQIYGDTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTNEETWGVNYRALRDLFDISKERTNAIKYEVYVQMIEIYNEQVRDLLVIDASNRRLDIRNNSQLNGLNVPDAFIVPVTCTQDVLDLMRIGQKNRAVGATALNLRSSRSHSVLTVHVRGVELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQYINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHISPEVNAIGETLSTLKFAERVASISLGAAQTNKETGEIRQLKEEIAGLKLALERKETELEQWKNGNNSRNAIESQKGRAISPYRLPKYGNSSATTMKSETCQRPTPTDDKTFEGRSCSSGKQRRSRFPSALDSPMAKMENINSHKGRSPSPPVIRRSQSTERGSSVIKIKVKIDTADNNNNNNHQTQPIIKHPFPSSRKLHQEINEEEQFKQALSVVRQGGIRKITKVDGNNNNNYYYNKGKAKNNNCQLLSPFKINQKHDMVMPTTTFGEIALESPRTSDYSDQSENSLGFTESVTDCGALNLTKMHDNFPRTSHNLFGSRGMVQGGEPLSASRVENKFLSGSGGSNTKESSKTVTMPEFRRSRSTPRGKFLGLS 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00503 1136 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 32 956 - -
Aip01g00503 1136 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 956 1131 - -
Aip01g00503 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 821 IPR027417 -
Aip01g00503 1136 SMART ch_5 65 182 IPR001715 GO:0005515
Aip01g00503 1136 SUPERFAMILY Calponin-homology domain, CH-domain 60 204 IPR036872 -
Aip01g00503 1136 MobiDBLite consensus disorder prediction 1098 1122 - -
Aip01g00503 1136 PRINTS Kinesin heavy chain signature 531 552 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 PRINTS Kinesin heavy chain signature 654 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 PRINTS Kinesin heavy chain signature 685 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 PRINTS Kinesin heavy chain signature 734 755 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 MobiDBLite consensus disorder prediction 1 38 - -
Aip01g00503 1136 MobiDBLite consensus disorder prediction 1098 1136 - -
Aip01g00503 1136 Gene3D Kinesin motor domain 398 786 IPR036961 -
Aip01g00503 1136 ProSiteProfiles Kinesin motor domain profile. 456 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 ProSiteProfiles Calponin homology (CH) domain profile. 63 184 IPR001715 GO:0005515
Aip01g00503 1136 Pfam Kinesin motor domain 462 784 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00503 1136 MobiDBLite consensus disorder prediction 19 38 - -
Aip01g00503 1136 Coils Coil 798 825 - -
Aip01g00503 1136 Gene3D - 49 198 IPR036872 -
Aip01g00503 1136 Coils Coil 436 456 - -
Aip01g00503 1136 MobiDBLite consensus disorder prediction 842 925 - -
Aip01g00503 1136 MobiDBLite consensus disorder prediction 903 925 - -
Aip01g00503 1136 Pfam Calponin homology (CH) domain 65 184 IPR001715 GO:0005515
Aip01g00503 1136 MobiDBLite consensus disorder prediction 863 880 - -
Aip01g00503 1136 PANTHER KINESIN-LIKE PROTEIN KLP-3 956 1131 - -
Aip01g00503 1136 PANTHER KINESIN-LIKE PROTEIN KLP-3 32 956 - -
Aip01g00503 1136 MobiDBLite consensus disorder prediction 847 862 - -
Aip01g00503 1136 SMART kinesin_4 454 792 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00503 Aip-Chr1 7015863 7028292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00503 386 784 Calmodulin-binding Proteins AT5G65930 39.500 1.73e-76 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00503 01 7015863 7028292 Aip01g00503 01 7015863 7028292 ECH
Aip01g00503 01 7015863 7028292 Aip07g00133 07 1026890 1034137 PCT