Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00502 ATGGATACTAAATCAGCTGTTGATTTGATGGAGTCTTCCTCCGAGGTTCACTTTTCTGGATTTCACATGGATGGTTTTGAGCAAAGAAAGTCAGGCATGGAACAACCGACAACATCAGCGACTGACATGTATAAACAACCATTTGTCATAGGTGTTGCTGGTGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAACTTCATGATCAACGAGTTGTATTAGTTAATCAGGATTCTTTTTACCATAACTTGACTGAAGAGGAACTTGCTCGTGTACAGGATTACAACTTTGACCATCCTGCAGATGCTTTTGATACTGAGCTATTGCTATGTGTTATGGACAAGTTGAAGCGTGGTGAGGCAGTAGATATTCCAAAGTACGACTTCAAGAGTTACAAGAGTGATGTGTATCCAAAAAGAAGGGTAAACCCCTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTCTGGCGAGAAGGATTAGACGAGATACTGGCGAGAAGGGTCGGGATATTGCAGTAGTTCTTGATCAGGTAACAACTTCTGTCCACACCATGCATGCTACCATGAATGACTTGTTTTCATTTGATGATTTTATTCTCCCTACAAAGAAGTATGCTGATATCATTATACCGCGTGGGGGAGATAATCATGTAGCCATTGACCTGATTGTACAGCATATCCGCACGAAGCTTGGTCAACATGACCTGTGTAAAATATATTCCAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTGATACGTGATGCTCAGATAACAAAGCACGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGGCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGTTCTGTATACACTGGCGTGGACTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATCGGGAAAATTCTAATTCACAGAGAAGGTGACAACGGTCAGCAGCAGCTAATATACGAAAAGCTTCCAAACGATATCTCGGATAGGCACGTGTTACTGTTGGATCCTATCCTTGGCACAGGTAATTCGGCTGTACAAGCGATCTCTTTACTTATAAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTGATATCTGCACCTCAAGGTGTTCATGTGGTCTGCAAAAAGTTTCCTAGAATAAAAATAGTGACATCTGAGATCGAGATTGGTTTGAATAAAGATTATCGCGTCATACCAGGCATGGGTGAGTTCGGCGACCGGTACTTCGGAACAGATGATGATGAGCAGTTGGTGGTTCCTTCACAGTAG 1467 0.4192 MDTKSAVDLMESSSEVHFSGFHMDGFEQRKSGMEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPADAFDTELLLCVMDKLKRGEAVDIPKYDFKSYKSDVYPKRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKGRDIAVVLDQVTTSVHTMHATMNDLFSFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIEIGLNKDYRVIPGMGEFGDRYFGTDDDEQLVVPSQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00502 488 PANTHER URIDINE KINASE 15 479 - -
Aip01g00502 488 Gene3D - 261 477 IPR029057 -
Aip01g00502 488 PRINTS Uridine kinase signature 180 190 - -
Aip01g00502 488 PRINTS Uridine kinase signature 47 64 - -
Aip01g00502 488 PRINTS Uridine kinase signature 77 88 - -
Aip01g00502 488 PRINTS Uridine kinase signature 123 138 - -
Aip01g00502 488 PRINTS Uridine kinase signature 194 205 - -
Aip01g00502 488 PANTHER URIDINE KINASE 15 479 - -
Aip01g00502 488 CDD PRTases_typeI 334 450 IPR000836 -
Aip01g00502 488 SUPERFAMILY PRTase-like 260 478 IPR029057 -
Aip01g00502 488 CDD UMPK 49 257 IPR000764 -
Aip01g00502 488 Pfam Uracil phosphoribosyltransferase 275 477 - -
Aip01g00502 488 Gene3D - 43 260 IPR027417 -
Aip01g00502 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 250 IPR027417 -
Aip01g00502 488 Pfam Phosphoribulokinase / Uridine kinase family 49 245 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00502 Aip-Chr1 6977126 6981787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00502 1 480 PRT Gene Family AT4G26510 80.498 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00502 K00876 - gmx:100527893 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00502 01 6977126 6981787 Aip01g00502 01 6977126 6981787 ECH
Aip01g00502 01 6977126 6981787 Aip07g00132 07 1014405 1018400 PCT