Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00495 ATGAAAGGGAAGAACAGGAAGAAAAGAAGAAAAGCTTTGAATTGGAGCATGGAGAAAGAAGAAGTAGGTGCAAAATGGGTAACACACTATTCAAGTGATCACCAAATACTGTTGGTTGGGGACGGTGATTTCTCCTTCTCTCTTTCACTCGCACGATCCTTCGGTTCTGCTTCCAACATTGTAGCTTCTTCTCTTGATTCCTATGATGATGTTACCAAGAACTACAAGCAAGCGAAATCGAATTTAGACGAACTAAAACAGCTAGGAGCGTGCTTGTATTACGGAGTGGATGCAACCAAGATGAAGTATCTTCTGGAATTGAAGATGCGCAGGTTTGATCGCATTATATTCAACTTTCCTCATGCAGGTTTCCATGGAAAGGAAGACAACTTGACAGTGATTAAGAAGCATAAAGATCTTGTGCTTGGTTTCTTCAAGAATGCAAGTTGCATGCTTAGTGCTAATGGTGAAATTCATGTGAATCATAAGACTAGTCCTCCTTTCAGCAACTGGGAGATTGAGAAGCTTGGTGAACAAAGCTTATTGACATTGATCGAGCTTGCCGACTTCAGGAAAGAAGATTACCCTGGTTATAACAACAAGCGAGGCGATAGTGGTAGATGCGATGAACCCTTTCCACTCGGAATGTGCAGCACTTACAAGTTTATTAGAGCTACAATGAGGAAGTGCGAGAGGAAAAGGAAAAGGGGTTCAGGAGAGCAAATATGTCGCCCATATCTAGAAATACAAGATGCTAGGCAGCAATTACCAACTACTTCAGTTGATCTCAATTGTTATTCTCAATCAAGTGAGGTTTCGAAATTCCCGCGAATTGTGTCATCAGACTCATCACTCTATGGTTTGTCAAATGAACATGCTTCAATCAGATGTGGCTACCTGAACAATGTCGATGCAACACACCATAGAGCTGCTCATTGTGCTGCCTACTATTATGGTCAGGGTATGAGACAGAGCTCTCAGAGATTGTTGCAGCCTTTGCAACCAATGAAGCCATTGAATCCTTTCCAACTTTGGCCAACATCAACTAATGTTAGATATTCTCAAACATATTATGTTAGAACAATGGATATCACTCGACTGCCACTTGTTGCTAGAAATGAAGGCTACCAGGTCTATAGTGGCAGTTCAAATTATATGGGAGAAGCAGTTGGTGGAACAGTTCAAAGGTATCACTATGAAAGAGTAGAGAGACCTCAATTCCAGAGTTATCTCTCTGAGTTGCATTGGGAAGTTGTCAATGGTGGCAACTATGTTCATAGTGACATTCCCAGGATGGGTGTGATAGAAGAGAGGAATATGATGTTTATTAGGTCCTGA 1338 0.4141 MKGKNRKKRRKALNWSMEKEEVGAKWVTHYSSDHQILLVGDGDFSFSLSLARSFGSASNIVASSLDSYDDVTKNYKQAKSNLDELKQLGACLYYGVDATKMKYLLELKMRRFDRIIFNFPHAGFHGKEDNLTVIKKHKDLVLGFFKNASCMLSANGEIHVNHKTSPPFSNWEIEKLGEQSLLTLIELADFRKEDYPGYNNKRGDSGRCDEPFPLGMCSTYKFIRATMRKCERKRKRGSGEQICRPYLEIQDARQQLPTTSVDLNCYSQSSEVSKFPRIVSSDSSLYGLSNEHASIRCGYLNNVDATHHRAAHCAAYYYGQGMRQSSQRLLQPLQPMKPLNPFQLWPTSTNVRYSQTYYVRTMDITRLPLVARNEGYQVYSGSSNYMGEAVGGTVQRYHYERVERPQFQSYLSELHWEVVNGGNYVHSDIPRMGVIEERNMMFIRS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00495 445 Coils Coil 68 88 - -
Aip01g00495 445 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 37 202 IPR019446 GO:0070042|GO:0070475
Aip01g00495 445 PANTHER PHENYLALANYL-TRNA SYNTHETASE 20 226 - -
Aip01g00495 445 PANTHER BNAC06G26310D PROTEIN 20 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00495 Aip-Chr1 6876887 6880063 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00495 - - gmx:100802899 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00495 01 6876887 6880063 Aip01g00495 01 6876887 6880063 ECH