Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00492 ATGGGTGAGAGGGAAAGTGGAATTGGAGTGGGAAGCATTGTGATAGGAGGAGGGGTGTTCGATGGGAGGCCTTCGAATTCATCCTTGTCCAGAAATCGAAGACTTTCCATAACCAAAACAATCCAATCAAGACACTTTTTTGTCATCAAATATCACCATCCCATACCAATCAAAACTGCTGGAAAAAAAAAAGCTCACCATCACGGAGAGTTGTTGTTGGAAGGAATCTTGGATTGCATCCATGAAATCACAACGGCACTGGCCTTCGCTGACAGGATGAGCGATTCTGCTTACAAGGTCGACACCACCTCCCGCCTTGCTCAATGGCGAATCGACAACTTGGCCTCTTGCACTTACCGCAAATCCGATCCTTTCAAGATCGGAAAATGGAACTGGGTTTTGTTTGTTAAATTGTATCCAGAAATTTCGAATCTAACACGAGATAACCCCCCGATTGCGTCCTTCATCATTAGGGTGGTTAGTTCTGTTGGAGATCGCAAGTCCCTCACTCATCCAGAGATAAGAGATAAGCTGATAAAGAGCAACGAGGACTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATCGACGTTGAGTTCCTTGATTTGAAGACTGCATCCCCAAACGGTGAGGAACCTTGTTCTATTTGGGCTGCGGGTTTTACTCAGCAAAGATCAAATGCGACGGCGCTTGAGACTCTGGGTAAAATGCTAACAGAAGGGATTCACACAGACATAACCATCAATGCTTCGGACGGAAGCATAGGAGCTCACAGGGCAGTTCTGGCTGCCCAGTCGCCTGTGTTTTGCAGCATGTTTTCGCATGATCTCAAGGAGAAAGAGCTGTCAACTGTCAACATCCAAGACATGTCGATTGAAGCTTGCCAGGCACTTCTAAATTATCTCTATGGGATCATTAAGAATGACGAGTTTTTGATGCATAGATTAGCCCTTCTACATGCTGCTGATAAATATGACATATCTGACTTGAGAGAGGCATGTCATGAGAGTCTTCTAGAAGACATTGACACGAAAAATGTCCTCGAGAGGCTCCAGAATGCGTCGCTGTATCGGCTGATGAAACTGAAGATGAGCTGTATTAGATATCTTGTGAAATTTGGTAAGGTATTCGAAATTCGCGATGATTTCAATTGCTTTATGCAAAATGCAGATAGGGATTTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCATGGAAAGGATTCTGA 1239 0.4407 MGERESGIGVGSIVIGGGVFDGRPSNSSLSRNRRLSITKTIQSRHFFVIKYHHPIPIKTAGKKKAHHHGELLLEGILDCIHEITTALAFADRMSDSAYKVDTTSRLAQWRIDNLASCTYRKSDPFKIGKWNWVLFVKLYPEISNLTRDNPPIASFIIRVVSSVGDRKSLTHPEIRDKLIKSNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGEEPCSIWAAGFTQQRSNATALETLGKMLTEGIHTDITINASDGSIGAHRAVLAAQSPVFCSMFSHDLKEKELSTVNIQDMSIEACQALLNYLYGIIKNDEFLMHRLALLHAADKYDISDLREACHESLLEDIDTKNVLERLQNASLYRLMKLKMSCIRYLVKFGKVFEIRDDFNCFMQNADRDLIAEVFHEVLDAWKGF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00492 412 Pfam BTB/POZ domain 239 343 IPR000210 GO:0005515
Aip01g00492 412 SUPERFAMILY POZ domain 231 343 IPR011333 -
Aip01g00492 412 ProSiteProfiles BTB domain profile. 247 306 IPR000210 GO:0005515
Aip01g00492 412 PANTHER OS08G0495500 PROTEIN-RELATED 93 412 IPR044714 -
Aip01g00492 412 CDD BTB_POZ_ZBTB_KLHL-like 246 328 - -
Aip01g00492 412 PANTHER OS08G0495500 PROTEIN 93 412 - -
Aip01g00492 412 SMART BTB_4 247 345 IPR000210 GO:0005515
Aip01g00492 412 Gene3D Potassium Channel Kv1.1; Chain A 224 375 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00492 Aip-Chr1 6711617 6717727 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip01g00492 BTB 2.6e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00492 K10523 - gmx:100790186 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00492 01 6711617 6717727 Aip01g00492 01 6711617 6717727 ECH
Aip01g00492 01 6711617 6717727 Aip07g01529 07 27493648 27499994 PCT