Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00458 ATGCGAGGATTTCTTAAAGGGAGAAAATTATGGCGATATGTGACTGGTGATATTGCTTGTCCTGTTAAGCCAACTGTATCCAAAGATGGTGCCTCCAAATCCAAGGAGGATGCTGAGAAGGAGAAGGACTATGCAGAGAAATTGGAAGATTGGGATAGTAAAAATCATCAAATTATCACTTGGTTCTACAACACTTCTACTCCTGGCATTCACTTACAGTTTGGGCGTTTTGAAACTGCTAAAGAGGTATGGGATCATTTGGCAAAACGTTACACTATCTCTGATCTCTCTCATCAGTACCAACTGCTTAAGGAACTTCACAGCCTTAAGCAAGAACGTGGCCAAGCAGTTTTTGATTTTCTTGCTCAGATGGAGATTATTTGGGATCAGTTGACCTCCTGTGAGCCTGTTCTTAAAGATCCCACTGATGCTAAGGCATATCAGGATTATCGGAACCGGACACGTCTCATCCAATTTCTGATGGCACTTACTGATGACTATGAGCCGGTCAGGGCTTCTCTTCTTCATCAGAATCCCTTGCCTAGTCTTGAAGATGCTCTTCCTCGTCTTAAGTCTGAAGAAACGCGCTTGGGATTGCTTCGTTCTaaaaTCTTCTTTTCCATCTTTTCCTTCCTCCTCTTCAGCTCCAACATCAAGCCATGGTGTAATTGCCACACGTGTCGCACCTACCTCAACATGTCATGGAGAACACGCTTCCTAAATCTCTATGATTGGTACACCCACCTCCTCCGCACTTCACCCACCAGAAGTATCCACTTCCACATCCTCGATAACAGTATCACCTCCAACCGACAACGTCCACTACATCCTCAAGATCAAGTTCCACAACTACCCCAATGGCACGCCTTTCTCCACTCTCCGACAAGCAATATAGATTATTGGACATTAGGACATCATGAGAAGATTGTCCTTTAA 936 0.4412 MRGFLKGRKLWRYVTGDIACPVKPTVSKDGASKSKEDAEKEKDYAEKLEDWDSKNHQIITWFYNTSTPGIHLQFGRFETAKEVWDHLAKRYTISDLSHQYQLLKELHSLKQERGQAVFDFLAQMEIIWDQLTSCEPVLKDPTDAKAYQDYRNRTRLIQFLMALTDDYEPVRASLLHQNPLPSLEDALPRLKSEETRLGLLRSKIFFSIFSFLLFSSNIKPWCNCHTCRTYLNMSWRTRFLNLYDWYTHLLRTSPTRSIHFHILDNSITSNRQRPLHPQDQVPQLPQWHAFLHSPTSNIDYWTLGHHEKIVL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00458 311 PANTHER GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED 40 201 - -
Aip01g00458 311 Pfam gag-polypeptide of LTR copia-type 51 196 - -
Aip01g00458 311 PANTHER - 40 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00458 Aip-Chr1 5919864 5924821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00458 212 270 Cytochrome P450 AT2G27690 52.542 9.68e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00458 - - ahf:112803201 388.267