Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00439 ATGAAGAAAACAAAGAAAGTCCCCATTATTTTACATAATAATAATAATAATGTTGGACACCAACAACATCATAAGAAGACTCATCATCATGCTTCTTTGCTGACAAATTTTAAGTCTGCTGTGATGAAATGTGCAAGTTTTTTTGCATTGTTTCTTTCTGGAAAAAGAAACACACAAGAATCAAAGGTTGTTGAAGACAGAAAGAGTACAAACAAAGTCAGAGGAGCATCATCTTCATCTGATTTATCATCTGATAGCAACAAGAGTTCATCCTCAAAATTGAAGTTTTCACATTCCTATGGATCATCTAGCACTTCAAATACTCAGCTTGGAACTGCAGGGAACTTCTCCTTTGAAGAAATCTACAAGGCAACAGCAAAATTCTCTGCAGCTAATAAGATTGGGGAAGGTGCCTTTGGAACTGTTTATAAGGGAAAGCTTACTGATGGAACTCTTGTGGCCGCAAAGCGCGCCAACAAGGATGTAGAAAACAAGAACTTAGCTGAGTTCAAAAATGAAGTATCCACTTTGTCAAAGATTGAGCATCTCAATCTTGTGAGGCTGTATGGATATTTGGAGCATGCAGATGAAAAGATTATTGTTGTTGAATATGTTAATAATGGATCACTCCGGGAACATCTAGATGGTACAAGGGGTGATGGGCTAGAAATTGGTGAGCGTTTAGACATAGCAATTGATATAGCTCATGCAGTTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAACATCTTACTTACTGACAAACTAAGGGCTAAAGTGGCCGACTTTGGTTTCGCCCGGCTGGCTGCTGAAGACCCTTCTGCAACCCATGTTTCAACACAACTTAAAGGAACAGCAGGCTACATTGATCCTGATTACATGAGATCTTACAAGCTTTCTGAGAAGAGTGATGTGTATTCCTTCGGCGTGTTGCTTGTTGAGATGGTTACCGGACGACATCCAGTTGAGCCGAGGAGACCCCTCAGTGAGAGAGTTACAATTAAATGGGCACTGCAGATGCTGAAACAGGGAGAAGTTGTGATCGCCATGGATCCGAGGCTGCGAAGAAGTACGGCCTCGAAAAAGGCCGTAGAGAAGGTTCTAAAGCTAGCTCACCAGTGCCTTGCACCTTCAAGACAATCAAGGCCAACCATGAAGACATGTGCTGAGGTTTTATGGGGTATCCGGAAAGATTTTAGAGACAAAACATCTTCTCATCTTAGCCATGATTCTCACCATTCTGCTAAGTATCCTCATAGAGATGCCAAGAATGACAGGCATAAGTTATTTGATATTGAAGGTGACAATGACCGTAAATTTGTATCTGCATAG 1359 0.4062 MKKTKKVPIILHNNNNNVGHQQHHKKTHHHASLLTNFKSAVMKCASFFALFLSGKRNTQESKVVEDRKSTNKVRGASSSSDLSSDSNKSSSSKLKFSHSYGSSSTSNTQLGTAGNFSFEEIYKATAKFSAANKIGEGAFGTVYKGKLTDGTLVAAKRANKDVENKNLAEFKNEVSTLSKIEHLNLVRLYGYLEHADEKIIVVEYVNNGSLREHLDGTRGDGLEIGERLDIAIDIAHAVTYLHMYTDHPIIHRDIKASNILLTDKLRAKVADFGFARLAAEDPSATHVSTQLKGTAGYIDPDYMRSYKLSEKSDVYSFGVLLVEMVTGRHPVEPRRPLSERVTIKWALQMLKQGEVVIAMDPRLRRSTASKKAVEKVLKLAHQCLAPSRQSRPTMKTCAEVLWGIRKDFRDKTSSHLSHDSHHSAKYPHRDAKNDRHKLFDIEGDNDRKFVSA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00439 452 Pfam Protein tyrosine and serine/threonine kinase 131 401 IPR001245 GO:0004672|GO:0006468
Aip01g00439 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Aip01g00439 452 Gene3D Transferase(Phosphotransferase) domain 1 205 430 - -
Aip01g00439 452 SUPERFAMILY Protein kinase-like (PK-like) 102 404 IPR011009 -
Aip01g00439 452 Gene3D Phosphorylase Kinase; domain 1 99 204 - -
Aip01g00439 452 MobiDBLite consensus disorder prediction 73 108 - -
Aip01g00439 452 Coils Coil 153 173 - -
Aip01g00439 452 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 16 423 - -
Aip01g00439 452 MobiDBLite consensus disorder prediction 412 435 - -
Aip01g00439 452 SMART serkin_6 128 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00439 452 MobiDBLite consensus disorder prediction 59 108 - -
Aip01g00439 452 PANTHER RECEPTOR-LIKE PROTEIN 55 16 423 - -
Aip01g00439 452 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Aip01g00439 452 ProSiteProfiles Protein kinase domain profile. 128 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00439 Aip-Chr1 5615284 5618584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00439 96 405 Receptor kinase-like Gene Family AT4G39110 41.534 1.23e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aip01g00439 PK_Tyr_Ser-Thr 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00439 - - gmx:100815871 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00439 01 5615284 5618584 Aip01g00439 01 5615284 5618584 ECH