Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00422 ATGATTGAAATTGAGACACTTCCTCTACTCTATACTCTTATTGCTTTGTTATTCGCATATTTACTTTGGTTCCACCTTTTCTCTCGAACCCTAACCGGTCCGAGAGTGTATCCTTTCCTTGGAAGCCTTCCAATCCTTTTCATGAATCGAAATCGGGTTCATGATTGGATTACCCTAAATTTAATAGGCCGAATCAAAGTTTCTGGTTCGGCCACATACCAGACTTGTATCCTCCCTTTTCCTTTCTTGGCACGTAAGCAAGGGTTTTACACAGTCACGTCCAATCCCAAGAACATCGAGCACGTGCTCAAAGTCAGATTTGATAATTACCCGAAAGGGCCCAATTGGCAAACAGCATTCCATGATCTCTTGGGCCAAGGGATCTTCAACAGCGACGGTGCCACGTGGCTGATTCAGCGCAAGACGGCGGCTTTGGAGTTCACGACGCGAACCCTAAAGCATGCCATGAGCCGATGGGTGAACCGTACAATCAAGAACCGGTTGTGGTGCATCTTGGATAAAGCAGCAAAGGAGGGTGTAGCGGTGGACCTTCAGGACCTTCTTCTCAGGTTGACTTTTGATAACATTTGTGGACTCACGTTTGGGAAGGACCCAGAAACTTTGTCACCGGATTTGCCTGAAAACCCTTTCTGCAATGCCTTTGATTCTGCAACTGAAGCTACGTTGCATAGGCTTTTGTATTACCCTGGGATCTTGTGGAGGTTCAAGAAGCTTCTATGCATTGGTTCCGAAAAGAGGCTCATGGACAGTTTGAAGGTCGTTGACGATTACATGAACGTCGTCGTCTCCAATCGTGACAAGTCATCCTCCGACGACCTAATCTCCCGCTTCACCAGCAAGCGTGACGGCGATGGCAACCCCTTCTCCGCCGCCGCACTCCAACGCATCGCCCTCAACTTCGTCCTCGCCGGCAGGGACACCTCCTCCGTCGCCCTCTCCTGGTTCTTCCACCTCGTCTCCTCCCACCCCGCCGTCGAAGATCGCATCCTCCGCGAGCTTACGGCGGTCCTCTCCGCCTCTCGCGGCTCGGATCGCTGTCGCTGGACGGAGAATGCTATCGACTTCGAGGAGGCGGAGAAGCTTGTTTACCTCAAAGCCGCACTCTCCGAAACGCTGCGTTTATACCCATCAGTTCCCGAGGATTTTAAGTACGCATTAAACGACGACGTTTTGCCAGATGGCACCTTCGTTCCGAAGGGTTCGACGGTTACTTATTCGATTTACTCTGTTGGGAGAATGAAGAGTGTTTGGGGTGAGGATTGCATGGAATTTAAACCGGAGCGTTGGATTTCGGTTCAGGAGAACCGGGTTCGATTCGAACAGCCAAAAGATGGGTTTAAGTTCGTTGCTTTTAATGCTGGACCGAGAACCTGCTTGGGCAAGGACTTGGCTTACCTTCAGATGAAGTCTGTGGCTGCGGCTGTGCTTTTGAGGTACCGGATATTGCCGGTTCCCGGTCACAAGGTCGAGCAGAAGATGTCGCTTACGCTGTTCATGAAGAATGGGCTCCGTGTTTACTTACAGCCGCGTCAGCTTCTACCAGAGAATGCCATGTACGCATAG 1584 0.5063 MIEIETLPLLYTLIALLFAYLLWFHLFSRTLTGPRVYPFLGSLPILFMNRNRVHDWITLNLIGRIKVSGSATYQTCILPFPFLARKQGFYTVTSNPKNIEHVLKVRFDNYPKGPNWQTAFHDLLGQGIFNSDGATWLIQRKTAALEFTTRTLKHAMSRWVNRTIKNRLWCILDKAAKEGVAVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFCNAFDSATEATLHRLLYYPGILWRFKKLLCIGSEKRLMDSLKVVDDYMNVVVSNRDKSSSDDLISRFTSKRDGDGNPFSAAALQRIALNFVLAGRDTSSVALSWFFHLVSSHPAVEDRILRELTAVLSASRGSDRCRWTENAIDFEEAEKLVYLKAALSETLRLYPSVPEDFKYALNDDVLPDGTFVPKGSTVTYSIYSVGRMKSVWGEDCMEFKPERWISVQENRVRFEQPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRILPVPGHKVEQKMSLTLFMKNGLRVYLQPRQLLPENAMYA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00422 527 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 5 519 - -
Aip01g00422 527 Pfam Cytochrome P450 91 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Aip01g00422 527 Gene3D Cytochrome P450 29 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PANTHER CYTOCHROME P450 5 519 - -
Aip01g00422 527 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00422 527 SUPERFAMILY Cytochrome P450 25 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00422 Aip-Chr1 5397288 5399260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00422 14 517 Cytochrome P450 AT5G58860 70.238 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00422 K15401 - gmx:100788343 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00422 01 5397288 5399260 Aip01g00422 01 5397288 5399260 ECH