Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00410 ATGCAAACTGGCTTGGCAATGATATGTGCTGGATCCGTACGTGCCGAGAATGCCATGAACATAATGCTAAACAATGTGGTTGATGCTGTGGTGTGGCCCATTGGGTTTGGTCATCCAGTGGTTGGCCAAGTCCAAGGTCAAGTGAGCTGTTCTTGGGCTCAGGAGCCATTGACTTTGCTGGGAGTGAGAGTGGTCCATATGGTTGGTGCCATTGCGGGCTTTTGGGGATCCATCATAGAAGGCCCACACGTCGGCCGATTTGATGCTTTTGGCAAGCCGGTCCCTCTTCAAGGCCATAATGCAACTCTTGTGATAACTAGACTTCAGTTGGTCAAACTGCTATTGTCACCACATTGGCCGGATCGACGGCTAGCACCGTCACCTTGTTCGGGCGACGATTATTAA 405 0.5086 MQTGLAMICAGSVRAENAMNIMLNNVVDAVVWPIGFGHPVVGQVQGQVSCSWAQEPLTLLGVRVVHMVGAIAGFWGSIIEGPHVGRFDAFGKPVPLQGHNATLVITRLQLVKLLLSPHWPDRRLAPSPCSGDDY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00410 134 PANTHER AMMONIUM TRANSPORTER 1 36 - -
Aip01g00410 134 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 59 106 - -
Aip01g00410 134 PANTHER AMMONIUM TRANSPORTER 59 106 - -
Aip01g00410 134 Pfam Ammonium Transporter Family 63 105 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip01g00410 134 Gene3D Ammonium transporter AmtB like domains 57 110 IPR029020 -
Aip01g00410 134 Gene3D Ammonium transporter AmtB like domains 1 46 IPR029020 -
Aip01g00410 134 SUPERFAMILY Ammonium transporter 1 105 - -
Aip01g00410 134 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00410 Aip-Chr1 5055865 5056738 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00410 1 29 Inorganic Solute Cotransporters AT4G28700 75.862 6.45e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00410 K03320 - egr:104431387 96.6709