Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00409 ATGGGCTGCCATTATTTGTGGGTTCGGCTCGGCTTGATCTTAATTGGGCTAAACATATTCGCATTAAAAATGAACTATGATGACCCATTAGAGGCAGCCCGATTGCACTTAGGGCTTCTTGTTTACAGGGTTATTTGCCAAAGAAAAATTTGTGATCCAAGCATACAATTCAGTGCAACAATGTGGCCCATGTTCTATGCCTTGAACAAGCTTAAATTGCTGAGAATCTCCATTGGTGAGGAAGTTTTAGGCCTTGATATCTCCAGACATGGAGGGTATGCTTATGCTCATGATCATGCTCATCAAGAGAATAATGATCCTCGTTCTCATGCAGATTATATGCATATTCAAGATGACCAATCAAAGTTTGATTTTATGATTCTACTAGTTTTAGGAATTGCCCTATAG 408 0.3946 MGCHYLWVRLGLILIGLNIFALKMNYDDPLEAARLHLGLLVYRVICQRKICDPSIQFSATMWPMFYALNKLKLLRISIGEEVLGLDISRHGGYAYAHDHAHQENNDPRSHADYMHIQDDQSKFDFMILLVLGIAL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00409 135 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 12 45 - -
Aip01g00409 135 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 57 118 - -
Aip01g00409 135 Gene3D Ammonium transporter AmtB like domains 8 103 IPR029020 -
Aip01g00409 135 PANTHER AMMONIUM TRANSPORTER 12 45 - -
Aip01g00409 135 PANTHER AMMONIUM TRANSPORTER 57 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00409 Aip-Chr1 5055283 5055792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00409 13 110 Inorganic Solute Cotransporters AT1G64780 34.091 4.50e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00409 K03320 - jre:109009016 94.3597