Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00408 ATGGCTGAGAAATGTGGGAACGATGGAGATTGCAAGCATTTGGTTTGTCACAGTGTTCCACCTTCTCCACCAAGACCTTGCGTAGCTGGATGCCTTGGTGGACAGTGCGGTTGCATTTGCCAACCACCAAAGCCAGGAGTGTTGCCCATTGGGTTTGTTCATCCAGTGGTTGGCCAAGTCCAAGGTCAAGTGAGCTGTTCTTGGGCTCAGGAGCCATTGACTTTGCTGGGAGTGAGAGTGGTCCATATGGTTGGTGCCATTGCAGGCTTAAACATCTTCAAATTAAAAATGAACTATGATGACCCATTAGAGGCAGCCCGATTGCATGGTGGGTGTGGCACTTGGGGCTTCTTGTTTACAGGGCTGTTTGCCAAAGAAGAATTTGTGATCCAAGCCTGCAATTCAGGTTCCACAGGAGTGGTAAGACCTTATTGTCTAATACTTGGAGGTGGATTTGGATTGATTGGAGCCCAAATTGTTGAGATTTTTGTAATCTTTGTATGGGTTAGTGCAACAATCTGGCCCATGTTCTATGCCTTGAACAAGCTTAAATTGCTGAGAATCTCCATTGATGAGGAAGTTTTAGGCCTTGATATCTCAAGCCATGGAGGGTATGCTTATGCTCATGATCATGCTCATCAAGAGAATAATGATCCTCGTTCTCATGCAGATTATATGCATATTCAAGATGACCAATCAAAGTTTGATTTTATGATTCTAGGGTGA 726 0.4463 MAEKCGNDGDCKHLVCHSVPPSPPRPCVAGCLGGQCGCICQPPKPGVLPIGFVHPVVGQVQGQVSCSWAQEPLTLLGVRVVHMVGAIAGLNIFKLKMNYDDPLEAARLHGGCGTWGFLFTGLFAKEEFVIQACNSGSTGVVRPYCLILGGGFGLIGAQIVEIFVIFVWVSATIWPMFYALNKLKLLRISIDEEVLGLDISSHGGYAYAHDHAHQENNDPRSHADYMHIQDDQSKFDFMILG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00408 241 Gene3D Ammonium transporter AmtB like domains 82 224 IPR029020 -
Aip01g00408 241 SUPERFAMILY Ammonium transporter 56 188 - -
Aip01g00408 241 Pfam Ammonium Transporter Family 58 207 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip01g00408 241 PANTHER AMMONIUM TRANSPORTER 87 230 - -
Aip01g00408 241 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 87 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00408 Aip-Chr1 5031393 5036271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00408 87 222 Inorganic Solute Cotransporters AT1G64780 50.000 9.27e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00408 K03320 - jre:118344481 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00408 01 5031393 5036271 Aip01g00408 01 5031393 5036271 ECH