Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00382 ATGTTACATCTTCTTCAGTGCATTGTGGGGGCATCAGTGACACAATATTTCTTCCTGCTGGGGATCCAATATACTTCTGCTACCTTTGCTTGTGCATTCATCAACATGGTGCCTGTGATCACATTCATTATGGCATTACTATTTGGGTTAGAGAGTGTGAACATCAAGTGCAAGAGTGGGAGAGCAAAGATTCTTGGGACATTGGTGTGCATAGGGGGTGCATTGTTGTTGACACTCTATAAAGGAAAGCCCTTGTTTAACTATGCTTCTGCAACTTCTATAGAAAAGACAGGAACAAGTAGTAGTAGTGGAAGATGGACCATTGGTGTTGTGGCTTTGATTCTTGGAACACTGTTTTGGTCATCTTGGTACATAGTACAGTTAAGCATAAGCAAGAGGTTCCCATGTCAATACTCAAGCACAGCCCTGATGATCTTCTTTGGAGCCATTCAAGCAGCTTTCATAAGCTTGTCCATTCAACACCATGATTTCTCCATTTGGGTTCTCAATGGAAAGCTTCCAATAATTGCTGTTCTGTTCTTTGTGAGTCACTAA 555 0.4162 MLHLLQCIVGASVTQYFFLLGIQYTSATFACAFINMVPVITFIMALLFGLESVNIKCKSGRAKILGTLVCIGGALLLTLYKGKPLFNYASATSIEKTGTSSSSGRWTIGVVALILGTLFWSSWYIVQLSISKRFPCQYSSTALMIFFGAIQAAFISLSIQHHDFSIWVLNGKLPIIAVLFFVSH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00382 184 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 81 - -
Aip01g00382 184 PANTHER WAT1-RELATED PROTEIN 4 180 - -
Aip01g00382 184 Pfam EamA-like transporter family 4 78 IPR000620 GO:0016020|GO:0016021
Aip01g00382 184 PANTHER WAT1-RELATED PROTEIN 4 180 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00382 Aip-Chr1 4642847 4643629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00382 7 184 Nodulin-like Gene Family AT3G30340 47.253 1.56e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00382 - - aip:107620858 342.428