Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00377 ATGAACCCATCTCACCAAGTTATGGAACAAGGAACATCACAGCAGAATCTAAAGAGGGGGTGTTGTGCAACCGTGCTTACTCTGGCTTACCAGAGTCTTGGAGTAGTTTATGGTGACCTCAGTACCTCACCTCTATATGTTTACAAGACTACATTCTCAGGGAAATTGAGTCTCAAAGAAGATGATGAGGAGATTTTCGGCGTTCTCTCGTTTATCTTCTGGACATTTACCATTATCGCGCTCTTCAAATATGTCTTCATTGTGATGTCTGCTGATGACAATGGGGAAGGAGGTACCTTTGCATTGTACTCACTTCTCTGCCGAAACGCGAGGCTAAGTATTTTGCCTAATCAACAACCAACAGATGAGAAGTTGTCCACTTATGCCACACAAGATTCTGCAGACACATGGCAGTCTTCACTTTTGAAGTTGTTCTTCGAAAAGCATCCGAGGTTCCAGAGAGGGCTGCTGATCTTTGTTCTTCTTGGAACATGTATGGCAATCGGTGATGGTGTCATAACTCCGGCGATTTCAGTTCTTTCAGCAGTATCAGGTGTTAAAGTTAAAATCAGCCACCTCCATGATAATTATGTTGTTGTGATCTCATGCATCATCTTAGTGGGACTTTTCTCCATTCAGCATCACGGCACACATAGAGTCGCTTTCTTGTTTGCACCAATTGTTGCAGCATGGCTTTTATGTATCAGTGGCATTGGTATATACAATATATACCACTGGAACCCAAAAATATATCTTGCACTTTCTCCTTTCTACATGTTAAGGTTCATTCGAGCAACCGGCGTTGAAGGATGGTTGTCGTTAGGTGGCGTGGTGCTATCAATCACAGGTGTCGAGACCATGTTCGCCGACTTGGGTCATTTTTCGGCTTTATCAATAAAGATAGCTTTCACATGTCTAGTATATCCCTGCCTCATTCTGGCATATATGGGTGAGGCTGCATTCCTTTCTAAGCATCATGATGACATTCAGAGAAGTTTCTACAAAGCCATACCAGAAGGTGTGTTTTGGCCAGTGTTCATAGTGGCAACTATGGCAGCCATTGTAGGAAGCCAAGCAGTAATTTCTGCTACCTTTTCCATTATAAGCCAGTGTTGTGCATTGAATTGTTTTCCTTGGGTGAAGATTGTTCATACTTCAAGCAGAATATATGGGCAGATATACATCCCAGAAATCAATTGGATATTGATGTGCCTTTGTTTATCTGTTACAATTGGCCTAAGGGATACTAATAGGATGGGACATGCATATGGGCTGGCAGTTACGACGGTTATGTTTGTAACAACATGCTTGATGACACTAGTAATAGTGATTGTTTGGAAGCAAGGAATAATAAAAGCCATTGCATGTTTGGTAGTGTTTGGATCAATTGAACTACTTTACATCTCAGCTTGCATCTGCAAGGTTCATGAAGGAGGTTGGATTCCACTTGTTCTATCTTTCACTTTCATGTGTATAATGTACACATGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAAAACAAGGTTTCACTCAACAGGATACTGTCTATGGGGCCGTCCCTCGGCATGGTTCGCGTGCCGGGAATAGGACTAATGTACACAAATCTTGCTTCTGGTTTCCCTGCCATGTTTGGCCATTTTGTCACAAACTTGCCTGCATTCCATCAGGTGCTAGTTTTTGTCTGTGTAAAATCTGTTCCGGTCCCTTATGTCGGCGAGGATGAACGGTTGATTGTTAGTAGGGTTGGTCCTAAGGAGTTCGCCATGTTTCGCTGCATTGTGAGGTATGGTTACAAGGACATACAACAGGAGAATTATAATTTTGAGAACAGATTGGTATCAACTATAGTACAATTTGTAGAAACTGAGGAAGAACAGAACAATAATACAGAATCAACATATGAAATTTCCACAAATGTAGAACAAGAGTTCCAATCTTCAAGTATTTTGCAAGTGATGCATAATGCTGAAGAGAATCATGATGGTGATGAAGAGAATCCCTTGAAGAATGAGTCTATGCAGATTTTGAATGCTAAAGAATCTGGTGTTACATATATGCTTGGACATTCCTATGCAAAGGCAAAGAAATCATCTTCCATAGTAAAGAAAATTGCAATAGATGTTGTTTTTGCTTTTCTGAGCAAGAATTGTAGAGAGCCTGATGTTGTTTTGAATATAGCCCATTCTTCATTGCTTGAGGTTGGTATGGTTTACTATGTCTGA 2232 0.4086 MNPSHQVMEQGTSQQNLKRGCCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLKEDDEEIFGVLSFIFWTFTIIALFKYVFIVMSADDNGEGGTFALYSLLCRNARLSILPNQQPTDEKLSTYATQDSADTWQSSLLKLFFEKHPRFQRGLLIFVLLGTCMAIGDGVITPAISVLSAVSGVKVKISHLHDNYVVVISCIILVGLFSIQHHGTHRVAFLFAPIVAAWLLCISGIGIYNIYHWNPKIYLALSPFYMLRFIRATGVEGWLSLGGVVLSITGVETMFADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHDDIQRSFYKAIPEGVFWPVFIVATMAAIVGSQAVISATFSIISQCCALNCFPWVKIVHTSSRIYGQIYIPEINWILMCLCLSVTIGLRDTNRMGHAYGLAVTTVMFVTTCLMTLVIVIVWKQGIIKAIACLVVFGSIELLYISACICKVHEGGWIPLVLSFTFMCIMYTWNYGTMKKHQFDVENKVSLNRILSMGPSLGMVRVPGIGLMYTNLASGFPAMFGHFVTNLPAFHQVLVFVCVKSVPVPYVGEDERLIVSRVGPKEFAMFRCIVRYGYKDIQQENYNFENRLVSTIVQFVETEEEQNNNTESTYEISTNVEQEFQSSSILQVMHNAEENHDGDEENPLKNESMQILNAKESGVTYMLGHSYAKAKKSSSIVKKIAIDVVFAFLSKNCREPDVVLNIAHSSLLEVGMVYYV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00377 743 Pfam K+ potassium transporter 30 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip01g00377 743 TIGRFAM kup: potassium uptake protein 28 743 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip01g00377 743 PANTHER POTASSIUM TRANSPORTER 8 630 - -
Aip01g00377 743 PANTHER POTASSIUM TRANSPORTER 670 743 - -
Aip01g00377 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 630 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip01g00377 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 670 743 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00377 Aip-Chr1 4413761 4418019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00377 122 743 Inorganic Solute Cotransporters AT2G30070 70.257 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00377 K03549 - gmx:100800428 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00377 01 4413761 4418019 Aip01g00377 01 4413761 4418019 ECH