Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00372 ATGGAAGAATTAAAGTTGAGAATAAGAAAGTATGAGGTTGAATCTGATGGAGCTAAAGTTGAAGAACTTGAGAGAAGATGTGAGGTAGGGCCTTCAGAAAGGGTCTTCCTCTTTACAGACACTATGGGTGACCCTATTTGTAGGATCAGGAACAGTCCCATGTACATCATGCTGGTAGCAGAAATGGACAAAGAATTAGTTGGAGTGATTCAAGGATCAATAAAAGTGGTAACAATTCATAACCACCCTCCAAAAGATTTGGCTAAGGTTGGTTATATTTTAGGCCTAAGGGTTTCACCAAACCATAGAAGAAGAGGGATTGGATCAAGCCTAGTGGTGAGGCTAGAAGAATGGTTCAATTCCAATGATGTTGACTATGCATACATGGCCACAGAGAAAGACAACATTGCCTCAAAAAGGATCTTCATGGAAAAGTTCACTTACACCAAGTTTAGGACACCATCAATATTAGTCAACCCTGTGAACCACTACGATCTCCAAATCTCATCCAACATTGAAATTTCAAGAGTCAAGATTGAACAAGCTGAGTACCTCTATAGAAGGTTCATGAGTTCCTTTGAGTTCTTCCCCAATGACATAGATAACATTTTAAGAAACAAATTAAGTTTGGGAACATTTGTGGCCAACTTCAAAGAAGATCATTTTTGGGGTGATTTTGGGTCAAATGGGCATCAGGTACCAAACTCTTGGGCCATGCTTAGTGTATGGAATAGTGGTGAAATATTCAAAATGAGGCTTGGAAAAGCAACTTTTAGTTGCTTGTTATACACAAAGAGTTGGTGCTTGATTGATAAGATTTTCCCATGTTTGAAATTGCCTACTTTGCCCGATTTCTTTAACCCTTTTGGATTCTATTTCATGCATGGTGTGTACCATGAAGGTCCATTCTCAGGTAAATTAGTAAGGGCTTTGTGCCAATTTGTGCATAACATGGCCTCAAAGTCAAAGGATGAGAATTGCAAGATCATTGTGACTGAGGTTGGAGGGGGGAAGGATAATAATAACAATGAGCTCAACCATTATATTCCACATTGGAAGTTGCTCTCTTGTCCTGAGGATTTGTGGTGCATAAAGGTTTTGAAAAATCATCAAGGGACTACAACAACAACAAACACTTTCCATGAGTTAACCAAATCCCCACCAAGAAGAGCACTTTTTGTAGACCCAAGAGAAGTTTAA 1200 0.3908 MEELKLRIRKYEVESDGAKVEELERRCEVGPSERVFLFTDTMGDPICRIRNSPMYIMLVAEMDKELVGVIQGSIKVVTIHNHPPKDLAKVGYILGLRVSPNHRRRGIGSSLVVRLEEWFNSNDVDYAYMATEKDNIASKRIFMEKFTYTKFRTPSILVNPVNHYDLQISSNIEISRVKIEQAEYLYRRFMSSFEFFPNDIDNILRNKLSLGTFVANFKEDHFWGDFGSNGHQVPNSWAMLSVWNSGEIFKMRLGKATFSCLLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMHGVYHEGPFSGKLVRALCQFVHNMASKSKDENCKIIVTEVGGGKDNNNNELNHYIPHWKLLSCPEDLWCIKVLKNHQGTTTTTNTFHELTKSPPRRALFVDPREV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00372 399 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 173 IPR000182 GO:0016407
Aip01g00372 399 Gene3D - 8 154 - -
Aip01g00372 399 Coils Coil 1 21 - -
Aip01g00372 399 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 155 IPR016181 -
Aip01g00372 399 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 399 - -
Aip01g00372 399 Pfam Acetyltransferase (GNAT) family 22 146 IPR000182 GO:0016407
Aip01g00372 399 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 399 - -
Aip01g00372 399 CDD NAT_SF 57 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00372 Aip-Chr1 4317368 4319223 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip01g00372 Acetyltransf_1 6.7e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00372 - - adu:107473078 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00372 01 4317368 4319223 Aip01g00372 01 4317368 4319223 ECH