Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00360 ATGACTCCGTTACAGCAATGGCTGCGCATGGTGGTACTTTGCGTGGTGTTCTTGAGCATCAAGAGCCAGTGTTGGACCCTAAAGAACAATCATGATCAAATACAAGTAGAAACAATTCATAGCACATATAACTCATGGCACATTGGACAACATAGGAAGCAACTTCTACAACTACAAGCACCAAAATCTTTTAAAATACACAAACCAAACAAAAGTAACAATAATAATAATAATAAAATCAAAGAAACTACTTCACCATCACCATCATATTTTCACTCTTCATCATTGTCACCAAATCCTGAAAGTTTCTCACCATCAGAAACTCCTTCAAATTCACCTTCATCTCCACTACCATTATCCCCTGAAGATTCTCATTCCCCTTCACCATCTCCATCCAAATCCAATACCTTTATTCGCAATCTTTCACCTTTACCTTCGCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGGGGAATCAAAGAGTTATTCAAGGCAACATTTTGTGATAGTTTGGTCAACAGTTGGTGGATTCTCATTCTTGGTTTTGGTGTCAGCAATTGTTTTTGCTTGCTTCAGAAGTAATAAAGTTGTGACTGTGAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAAAAAGCATTTGTAACAGGTGTTCCAAGTCTGAAAAGAGCAGAACTTGAAGTAGCTTGTGAATATTTCAGCAACATTATTGGTTCTATACCAGATGGAACTGTTTATAAGGGGACACTCTCCAGTGGAGTTGAGATAGCAGTGGCATATTCTTCAGTTACTTCATCTAAAAACTGGTTGAAAAGTATGGAAGCGCAATACCGGAAGAAGATAGAGACATTGTCAAGGGTGAACCACAAGAATTTTTTGAACCTGATTGGATACTGTGAAGAGAGAAAGCCATTCACAAGGGTTATGGTTTTCGAGTATGCTCCGAATGGAACACTATTTGAGCATCTGCATGTCCTAGAAGCAGAACAACTAGACTGGGGAATGAGAGTGAGGATAGCTATGGGAATAGCCTATTGCCTAGAACATTTGCATCAACTGACGCCGGCCGTCGCCCATGGAGACCTGATCTCTTCCTCTATATACCTTACTGAAGACTATGCTGCCAAGTTATCAGACCTTAGTTTCTGGAACAACATAAAAGATTCTGAAGCCATTCAGCTCTCTGAAACAACTTGGACACATATAAAGGACAATGTCTATAGCTTCGGCATGATACTGTTTGAATTGATAACCGGTAGGATTCCTTACGCCGTGGAAAACGGCTTTCGTGTGGATTGGACGGCAGAGTATATAAGGAGGCAGCCCTTGAAAGATATGGTGGATACAAGGCTGAACAATTTGAAAGAAAGTGAAGTTGAGAAATGGTCTCAAGTTATTAAGAGTTGTGTGCATCCAAATGCAGAGAAAAGACCAAATATGAGAGAGGTTGTTGCTAAGCTGAAGGAAATAACTGCTATGGAGCCTGATGGAGCAACTCCAAAATCATCACCACTATGGTGGGCAGAATTAGAAATTATGGATGCGAATTCAGACATTAATCCATGA 1599 0.3902 MTPLQQWLRMVVLCVVFLSIKSQCWTLKNNHDQIQVETIHSTYNSWHIGQHRKQLLQLQAPKSFKIHKPNKSNNNNNNKIKETTSPSPSYFHSSSLSPNPESFSPSETPSNSPSSPLPLSPEDSHSPSPSPSKSNTFIRNLSPLPSPXXXXXXXXXXXXXXXXXXXKGESKSYSRQHFVIVWSTVGGFSFLVLVSAIVFACFRSNKVVTVKPWATGLSGQLQKAFVTGVPSLKRAELEVACEYFSNIIGSIPDGTVYKGTLSSGVEIAVAYSSVTSSKNWLKSMEAQYRKKIETLSRVNHKNFLNLIGYCEERKPFTRVMVFEYAPNGTLFEHLHVLEAEQLDWGMRVRIAMGIAYCLEHLHQLTPAVAHGDLISSSIYLTEDYAAKLSDLSFWNNIKDSEAIQLSETTWTHIKDNVYSFGMILFELITGRIPYAVENGFRVDWTAEYIRRQPLKDMVDTRLNNLKESEVEKWSQVIKSCVHPNAEKRPNMREVVAKLKEITAMEPDGATPKSSPLWWAELEIMDANSDINP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00360 532 Pfam Protein tyrosine and serine/threonine kinase 246 498 IPR001245 GO:0004672|GO:0006468
Aip01g00360 532 SUPERFAMILY Protein kinase-like (PK-like) 228 498 IPR011009 -
Aip01g00360 532 Gene3D Transferase(Phosphotransferase) domain 1 325 511 - -
Aip01g00360 532 MobiDBLite consensus disorder prediction 66 110 - -
Aip01g00360 532 MobiDBLite consensus disorder prediction 57 167 - -
Aip01g00360 532 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 64 526 - -
Aip01g00360 532 MobiDBLite consensus disorder prediction 111 125 - -
Aip01g00360 532 Gene3D Phosphorylase Kinase; domain 1 217 324 - -
Aip01g00360 532 MobiDBLite consensus disorder prediction 126 142 - -
Aip01g00360 532 ProSiteProfiles Protein kinase domain profile. 242 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00360 532 PANTHER PROTEIN MALE DISCOVERER 2 64 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00360 Aip-Chr1 3964414 3969155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00360 222 507 Receptor kinase-like Gene Family AT4G31110 32.492 3.03e-38 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aip01g00360 PK_Tyr_Ser-Thr 4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00360 - - gmx:100814122 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00360 01 3964414 3969155 Aip01g00360 01 3964414 3969155 ECH