Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00359 ATGGCTAGTGGTGGTGATGATGGAAAAAACTCCATCACCATACCCCTTCTGGGTGATGAAAAAGTAGAACAGAGAAGCTTCTACAATGGAGATCAGCTACCTAAATCTGCCGATGATTTAGACTCAGTTCATGTTGGTAACACCTCCTTTTTCAAGACCTGCTTCCATGGGATTAATGCAATTTCAGGAATTGGAATTGTTTCAATACCTTATGCACTGGCTTCAGGGGGATGGCTAAGCATATCACTGCTATTTATGATAGCAATTGCTTGCTACTACACTGGCTTATTGGTAAAGAGATGCATGGACATGGACCCTCATATCAGAACCTTCCCTGACATTGGTCAACGTGCTTTTGGAGACAAAGGTAGATTAATGGTCTCCATAGCCATGAATTCAGAGCTCTACCTTGTTGTAACAGGTTACCTCATCTTGGAAGGTGACAACCTTAACAAGCTAATTCCAAACGTTGAAGTAAACCTTGGAGGGCTTGTGATTGGTGGAACAACAATCTTTGCAATACTAGCAACAATTGTGATCTTGCCAACAGTGTTGTTGGAGGATCTTAGCTTGTTGTCTTATGTTTCTGCTAGTGGCGCTTTGGCTTCCACAGTGTTCTTGCTCTCTCTGTTGTGGAATGGAACCATTGATGGGACAGGCTTTCATGGAAAAGGTACAGTTTTCAGGTGGAGTGGCATCCCTGCTGCAGTTAGTTTGTATGCATTTTGCTACAGTGCTCACCCTGTTCTTCCCACACTCTACAATGCCATGAGGAACAAGAATCAGTTCTCAAGTGTCCTATTTGTGTGCTTTCTAGTGTGCACTCTTGGTTATGCAGCAGCAGCAATCCTAGGGTACCTAATGTTTGGAGAAGATGTTGAATCACAGGTTACATTGAACCTTCCAACAGGGAAATTCAGTTCACAAGTTGCAATATACACAACCTTGGTGAATCCAATAGCCAAATATGCATTGATGCTAACCCCAATTGTGAATGCAGTAAAGAACAAGATCTCATGCAACTACAGAAAAAAGAGGCTCACACATGTTATTGTTAGTACCACATTGCTGATTAGCACTCTTGTTGTGGCAGTGGCAATTCCCTTATTTGGCTACCTAATGTCACTTGTTGGAGCATTGCTAAGTGTCTCAGCATCAATCCTTGTCCCATCCGTATGTTACTTGAAGATTTCTGGAGCTTACAAGAGATTTGGCTCAGAAATGATCATAAACTATTCAATTATTGTGATGGGTGTTACTATTGCGATTGTAGGCACTTACACTTCTCTTGTAGATATAATTCAAAATTTGTGA 1314 0.4155 MASGGDDGKNSITIPLLGDEKVEQRSFYNGDQLPKSADDLDSVHVGNTSFFKTCFHGINAISGIGIVSIPYALASGGWLSISLLFMIAIACYYTGLLVKRCMDMDPHIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNLNKLIPNVEVNLGGLVIGGTTIFAILATIVILPTVLLEDLSLLSYVSASGALASTVFLLSLLWNGTIDGTGFHGKGTVFRWSGIPAAVSLYAFCYSAHPVLPTLYNAMRNKNQFSSVLFVCFLVCTLGYAAAAILGYLMFGEDVESQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMLTPIVNAVKNKISCNYRKKRLTHVIVSTTLLISTLVVAVAIPLFGYLMSLVGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIVMGVTIAIVGTYTSLVDIIQNL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00359 437 PANTHER OS05G0424000 PROTEIN-RELATED 1 435 - -
Aip01g00359 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 435 - -
Aip01g00359 437 Pfam Transmembrane amino acid transporter protein 47 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00359 Aip-Chr1 3939367 3945423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00359 33 434 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.224 1.60e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00359 K15015 - gmx:100784690 658.677