Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00345 ATGGCAAATCATCATAAGAGAACCCTAAAGTTTGACATTAAACAAATTGTTTATGTGAAACCATCAAAACCCACACCAAATGGCAACATTTCACTCTCTGCACTTGATAATAGAGCTGATAACAATGGCCTATGCCATATTGTTCAAATATATCAATCACCGAAAAATGACCAAAATGACCCTGCCCTTATGATCAAAGAAGCACTCTCAAAGGCTTTGTTTTATTACTACCCTTTGGCGGGTAGAATAGTAAAACATGCTGATGGGAAACTTAGAGTTAATTGCAATGCAAATGGAGTTCCCTTTGTAGAAGCCATTGCTAATTGCAACCTTTCTTCTCTTCACTACCTTGATGGTAGTAACACAGAGATTGCAAAACACTTGGTACTTGATCTTCCTTCTGAAGATGAACATGGTTTCCAATTATACCCTTTGTTGATCAAGGTAACCAAGTTTCTATGTGGGGGTTTCACAATTGGCTTAGGAACCTCACATGCTATAATTGATGGGAGTGGAAAATCTCAATTCTTGCAAGCCATAGCCGAATTTGCAAGTGGAAAAACCGAGCCATCGGTGAAGCCTGCATGGGAGAGAGAAAAGCTTGTTGGGTCAATTACCAAAATGCCCTTGGAGATTCCTATGGATGAGTCTTCTGCCGCAGTCTCACCTTATTTGCCCACCAAAAAACTTGTTCACGCATGCTTTAAAGTTGACAATGAGAGCATAAAAAGGCTCAAGATGAGTTTGATGAAGGAAACTATTAGTGACCAAAACAATAACATGGAAGAAAGCTTCACAAGTTTTGAGTCTCTTGCTTCCTATGTTTGGAGGGCAAGAACAAGAACTTTGAAATTGAACAGTGATGGTAAAGTTATGTTGACTATCATAGTAGGGATAAGAAAGGACCTTCTTGATCCTCCTTTGGCTAAAGGGTATTATGGGAATATTGCTGTGGATGCAAATATTGTGTTGACTGCTAGAGAAGTCAACGAAAGACCACTCTCCCATGTAGCGAAGGTCATCAAAGAAACTAAGAAGGTTGCTCAGACAAAGGAGTACGTCAAGAGAATGATCGACACGTCGGCGACGGCGGCCGACGACGATTTCGATTACGATGGAAGGGGTGCGTGCATGGTTTTGACAGACTGGAAACATTTGGGTTTTTCAAAGAACATGGATTTAGGATGGACACAACCGGTGAATTTTGTTCCTGCCCCATGTGGTTTGTTTGATAAATTGCATTTGTGTATTTTCTCATCTCCGAGTAGCTTGGATCCTTCAATGGATGGAGGTGCTAGGATCTTTGTGTCACTCCCCAATGCTGCCATGCCCAAGTTTAGGAACGAGATTGAAGCTCTTATTACTAAACCATAG 1374 0.4098 MANHHKRTLKFDIKQIVYVKPSKPTPNGNISLSALDNRADNNGLCHIVQIYQSPKNDQNDPALMIKEALSKALFYYYPLAGRIVKHADGKLRVNCNANGVPFVEAIANCNLSSLHYLDGSNTEIAKHLVLDLPSEDEHGFQLYPLLIKVTKFLCGGFTIGLGTSHAIIDGSGKSQFLQAIAEFASGKTEPSVKPAWEREKLVGSITKMPLEIPMDESSAAVSPYLPTKKLVHACFKVDNESIKRLKMSLMKETISDQNNNMEESFTSFESLASYVWRARTRTLKLNSDGKVMLTIIVGIRKDLLDPPLAKGYYGNIAVDANIVLTAREVNERPLSHVAKVIKETKKVAQTKEYVKRMIDTSATAADDDFDYDGRGACMVLTDWKHLGFSKNMDLGWTQPVNFVPAPCGLFDKLHLCIFSSPSSLDPSMDGGARIFVSLPNAAMPKFRNEIEALITKP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00345 457 Gene3D - 6 209 IPR023213 -
Aip01g00345 457 Pfam Transferase family 13 452 - -
Aip01g00345 457 Gene3D - 225 450 IPR023213 -
Aip01g00345 457 PANTHER ACYL TRANSFERASE 4 6 454 - -
Aip01g00345 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00345 Aip-Chr1 3717181 3718832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00345 9 446 Monolignol Biosynthesis Gene Families AT5G48930 27.195 9.93e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00345 K20240 - gmx:100783730 489.189