Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00338 ATGGCAGCAACAAGAAGCATTGGCAATTGTATCCTCCGAAACCACTCCGTCTGTTTCTCCACTGCTTCTTGTTACCGGAAACAGATTTCCCTCGCCAGTCTCTTCCAAAGGTATGGTTTCCCCCCTTCCCAAATTCCCCACTTCATCTCCAACAACTCCTTTCTCTTAGATTCCAACATACCTGAACTCGAGAAATCACTTGCCACTCTCTTCTCCTTCCGAATTCCCCAAAATGCTGTTGTCTCCCTCATTCGCAATTGCCCTGCCGTGTTGGAACCCAAGTTCCTTCAAAACTGGGAGCAGGGATTGTCGAAGCTCAAGGCCATGAACCCTTCCTCATCCATGATTGTGAACTTCTTGGAGTGTTCTAGAAGATTCCAACTGGACCCGGTTGAGGCTTCCAAGAAAGTCGAGGAATTGAAGGGATTGGGATTTTCTGATGACGTTGTGTGGAAGGTTTTGGAGGGTTTTCCGAGTGTGATTGCAGTGAGCAGGAGGCAACTTGCTTCTGTGATTGAGTTTCTGGTGGAATTTGGGATTCCGAGGGATGAGGTGGTTGATCGAGTTGTGCGGTTGAACCCAAGGGTGTTGGGAATTGGGGTTGAGCAGAGGTTGAAGCCCCTGATTCGTGAATTGGAGGAGTTAAGATTTCCTAGGAATGAAATTAGGACCGAGGTAGTTAGGGTGCCAAGGGAGAGGATTTTTCAGGATGGTTTGCTGAGGGCTTGTTTTGAAGTGAAGTTAAAAGTGGATTGCTTGTGCGATCACGGTTTGATTCGAAGTGATGCTTTGAAGTTGTTATGGAAAGAGCCAAGGTTGATAACCTATGATGTAGAGTCCATTGAGAAAAAGATTGGGTTCTTGGTGCAGAGGATGAATTATAGTGTTGATTGTTTGCTTCATGTTCCTGAGTACTTGAGTGTGAACTTTGAGAAGCAGATTGTTCCTAGGTACAATGTGATGGAGTACTTGAAAGCGAAAGGCGCGCTTGGTTTCGAGGTTGGACTAAAGGACATGGTAAAGCCAACCAGGCTTAGATTTTACAATCTTTATGTCAAGCCCTATCCAGAGTGTGAAAAGATTTATGGGCGGTTTTCTGGAATTACCAAAGTTAAAAGTAAGCATCCACCTGGTCTATGGAAACTCTTTAAACCTCCCAAGTTCCTGACAACCGATGAAGATGCGAAGAATTTGAAGTCATTCATGAACACACTGGTATAG 1221 0.4513 MAATRSIGNCILRNHSVCFSTASCYRKQISLASLFQRYGFPPSQIPHFISNNSFLLDSNIPELEKSLATLFSFRIPQNAVVSLIRNCPAVLEPKFLQNWEQGLSKLKAMNPSSSMIVNFLECSRRFQLDPVEASKKVEELKGLGFSDDVVWKVLEGFPSVIAVSRRQLASVIEFLVEFGIPRDEVVDRVVRLNPRVLGIGVEQRLKPLIRELEELRFPRNEIRTEVVRVPRERIFQDGLLRACFEVKLKVDCLCDHGLIRSDALKLLWKEPRLITYDVESIEKKIGFLVQRMNYSVDCLLHVPEYLSVNFEKQIVPRYNVMEYLKAKGALGFEVGLKDMVKPTRLRFYNLYVKPYPECEKIYGRFSGITKVKSKHPPGLWKLFKPPKFLTTDEDAKNLKSFMNTLV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00338 406 Pfam mTERF 128 231 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 Pfam mTERF 249 347 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 43 402 - -
Aip01g00338 406 PANTHER CGI-12 PROTEIN-RELATED 43 402 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 Gene3D Transcription termination factor 3, mitochondrial 171 365 IPR038538 -
Aip01g00338 406 SMART mt_12 187 218 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 SMART mt_12 113 146 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Aip01g00338 406 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip01g00338 mTERF 6.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00338 - - aip:107646489 814.298