Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00325 ATGGCCACAGACGCAAAAACACCAACACCAGCAGCGAAATTTCAGAACGCAGAGTTTCGGGAATTAACGGCGCCGTTAACCTCCCAAGACGGCCTCCGTTTCTGGCAGCTAATGATCTCCGGTTCCGTCGCTGGCTCCGTCGAACACATGGCCATGTTCCCCGTCGACACTGTCAAGACCCACATGCAAGCCCTAGGCACCTGTCCGCTCAAACGAAACGTCACCGTTTCGCAAGCCCTAAGAACCATCATCACGTCGAACGGAGGGCCCATCGCTCTCTACCGCGGAATCGGCGCAATGGGCCTGGGCGCAGGCCCGGCCCATGCGGTCTACTTCTCCTTCTACGAAACCTGCAAGACCTTCTTCTCGCGCGGGAACCCTAACAATTCATTGGCGCACGCTGTTTCCGGTGTATGCGCCACTATTGTGAGCGATGCAGTGTTCACGCCGATGGACATGGTGAAGCAGAGGCTTCAGCTGAGTGGTGCGAATGGTTATCGTGGTGTCTGGGACTGTGTGAAGAGGGTGATGAGTGAGGAAGGGTTTGGTGCTTTCTATGCTTCGTATAGGACCACTGTGTTGATGAATGCGCCTTTTACCGCGGTCCATTTCGTTACTTATGAGGCTGCCAAACGCGGCCTTATTGAGGTGGCGACACCGGAGAGCGCCGATGACGAACGGTTGGTTGTTCATGCGACTGCTGGTGCCGCTGCCGGTGCTTTGGCCGCAGCGGTTACTACTCCACTTGATGTTGTTAAAACTCAGTTACAGTGTCAGATAGCAAGAGAGTACGAAGAATATGGATCTTAG 810 0.5481 MATDAKTPTPAAKFQNAEFRELTAPLTSQDGLRFWQLMISGSVAGSVEHMAMFPVDTVKTHMQALGTCPLKRNVTVSQALRTIITSNGGPIALYRGIGAMGLGAGPAHAVYFSFYETCKTFFSRGNPNNSLAHAVSGVCATIVSDAVFTPMDMVKQRLQLSGANGYRGVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFVTYEAAKRGLIEVATPESADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQIAREYEEYGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00325 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 269 IPR018108 -
Aip01g00325 269 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 4 265 - -
Aip01g00325 269 Pfam Mitochondrial carrier protein 32 124 IPR018108 -
Aip01g00325 269 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Aip01g00325 269 Pfam Mitochondrial carrier protein 227 261 IPR018108 -
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Aip01g00325 269 PRINTS Mitochondrial carrier protein signature 96 116 IPR002067 GO:0055085
Aip01g00325 269 Gene3D Mitochondrial carrier domain 219 268 IPR023395 -
Aip01g00325 269 Gene3D Mitochondrial carrier domain 14 218 IPR023395 -
Aip01g00325 269 PANTHER MITOFERRIN-1-RELATED 4 265 - -
Aip01g00325 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 213 IPR018108 -
Aip01g00325 269 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 121 IPR018108 -
Aip01g00325 269 SUPERFAMILY Mitochondrial carrier 31 261 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00325 Aip-Chr1 3524732 3525631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00325 1 259 Chloroplast and Mitochondria Gene Families AT1G07030 69.318 2.61e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00325 K15113 - gmx:100802640 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00325 01 3524732 3525631 Aip01g00325 01 3524732 3525631 ECH