Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00321 ATGAGAGTTTGGCCTGTCCTTCTCATCTTGCTGTTGCAGTTTGTTGAACCCTCACATGGCCAGACAAAGAGCCAACAGAACAACACAGGGTTCCAGTGCAGTGGAAGAAGCTATCCATGCCAGGCCTATGCTTTCTACAGAGCTCAGAGTCAGTTTCTTGACCTAGCTTCCATTGGAGACCTCTTCCAAGTCAGCCGTCTCATGATTGCAAATCCAAGCAACATATCCTCTAATTCAGTTTCCTCTCCTCTAATCCTAAACCAGCAACTCTTTATTCCCTTAACATGTTCCTGCAACTCCATCAACACCACCTTTGGCTCCATCTCTTATGCTAACATCTCCTACACCATCAAACCCAACGATACCTTCTACTTAGTCTCCACCAACAAGTTTGAGAACCTCACTACCTACCCTTCTGTTGAGGTTGTTAACCCAAACCTTGTAGCAACCAACCTCCAAATTGGGGACAATGCTATATTCCCTGTCTTCTGCAAGTGCCCCGACAAGAACACAACTGTGTCCAACACAAGAGCCAATTACATGATCTCCTATGTTGTCCAACCGTCCGACAACCTATCTTCGATTGCTTCCAGGTTTGGATCTCAGCAGAAGGCCATCACTGATGTCAACGGGAACAAATTCAACGTCTATGATACCATATTCGTCCCGGTGACGAAGCTGCCGGTTCTGTCACAGCCGAATACAAGCACTGCTGCTGCTCCTTCTCCGACTCCGGCCGGCAGCTCTGATGACAGGGCAGGCACCGTGAGAGGGCTGGCAATTGGATTGGGGATTGCTGGTTTGCTGCTAATGGTGGTGTGTGCGGTGTGGATGTATAGGGAGAGTGTGTTGAAGGGCAGGATGTGGGCGGGCAGGGACGAGGAGGAGCAGAGGCAGAAGGAGGGCAGGGTGTTTTCGGGAGGGGGAGATGGGAAAGGGAGTAAACCGATGGATGTGAAGCTGATGGCCAATGTGTCTGACTGCTTGGACAAGTACAGAGTATTTGGAATTGAGGAACTTGTAGAAGCCACTGATGCCTTCAGTGACAGTTGCCTCATTCAAGGTTCTGTTTACAAAGGTACTATTGATGGAGAAACCTATGCAATCAAGAAGATGAAGTGGAATGCCTATGAGGAGCTCAAGATCTTACAGAAGGTTAACCATGGGAATCTGGTGAAGTTAGAAGGGTTTTGCATAGATTCTGAAGAAGGGAATTGCTATCTAGTTTATGAGTACGTGGAGAATGGATCTTTGAACTGGTGGCTGCACGAAGAGGAAGGGAAGAATAAGGAGAAGCTAAACTGGAAGACAAGGGTGAGAATAGGCATAGACATAGCAAATGGTCTTCAATACATCCACGAGCACACAAGGCCAAGAGTAGTGCACAAAGACATAAAGAGCAGCAACATTCTGTTGGACTCAAACATGAGAGCCAAGATTGCCAACTTCGGGCTTGCCAAGTCAGGAATGAATGCCATTACAATGCACATTGTGGGAACTCAGGGCTACATTGCTCCCGAGTATCTGGCCGATGGCGTCGTCTCCACCAAGATGGATGTCTTCTCTTTCGGGGTGGTGCTCCTGGAGCTCATCTCTGGAAGGGAAGCCATCGACGAGGAGGGGAATCTACTGTGGATGAGTGCTATGAAGACCTTTGAAGGGGTAAGTAGTGATCAAGAGAAGGGTAGGAGGGTGAGGGAGTGGATGGACAAGGCAATCTTGAGGGACACAATATCTATGGATAGTTTGTTGGGAGTTTTGGGGATTGCTATTGCTTGTTTGCATAAGGAGCCTTCAAAGAGGCCTAGCATAGTGGATGTTGTCTATGCTCTCTGCAAGAGTGATGATGCAGGGTTTGAAACCTCTGAGGATGGGATTGGATCCCCAAAGGTCACTGCTAGGGTTTTCCCAATACATGATCATCACATTCGTCATTCGCGAACATTGATACAAAGCTTGAAACATATCGATGATGATTCTATTGCAACTTCCTTGGCCCTTTCTTGCCAATCAATGCAAGAGTTTCGCGCTGGGGGACTCTTCAATGGCGGTGGCAACAATCATACAGCCTCTACTTTCTCACTTCTAATGTTAGATCTCATTCTTATCATCGTCGTCACTCGCATTCTTCGCATTCTTTTTAAGCCTCTCAAACAACCTGAGCTGGTTTGTCAGATGATGGGTGGTATTATTCTTGGACCTTCTGTTTTGGGACGCCATGGATGGTTTAAACATAATGTAATGCCTGAAGCAGCTGAATTCTTGGTGAAAAATCTTGGAATAATGGGATTCATGTTCTTTGTTTTCATCTATGGTGTGAAGTGTGACCCAACCATGTTGAAAAAATCAGGGAAAATGCATTTGTACACGGCATTAGTTGGTATAAGCATTCCCTCAATGCTAACTTTTCTTGTGTCACTATACATGAGAAAAAACATGGACAAAGAACTTTCTAGAATAGCTTCACTAGGTGTAATTTCAGCGTACTTTGGGATCACAACATTCCCTGTTGTCCATAATATTTTGAAAGAGCTTAACCTTATAAACTCACATGTTGGGAGAATGGCTTTGTCTATGGCTTTAATTGGTGATGCAATTGGTACATGTTCAATTGTAGTATTTGAGGCTGGGAAACATGGAGAAACAGGAACAAAGCATGCAATTTGGTACACAATTTCTCTTGTACTGGTGCTAATGTTCATTATGTTTTGTGTAAGGCCCACGATGATGTGGATTCATAAGAACACTCCAGAAGGGCACCCAGTGGAACAATCTTATGTTGTTGTCATTCTTTTGGGTGTTTTTGTGTTGGGCTTTGTGACAGATATGCTTGGGATGGCAATTGCTAATGGGCCTTTGTGGTTGGGCCTTGTGATCCCTGATGGGCCTCCTTTAGGAGCAACAATAGTGGAAAAGAGCAAGACTATTATGACTGATTTTCTACTACCATTCTCATTCCTTATGGTGGGAACTCATACTGATGTGTTTGCTATGAGTGAGATTGATTGGTCTCATTTAGAACCATTGTTTTTCATGGTTTTAACTGGCTACTTGACCAAATTCTTTTCCACTTGGGTTGCTACATTCTATTGGCAGTTGCCATTTAGAGATGGACTTGCACTTAGCCTTATGATGAGCTTGAGAGGACAAATGGAGCTCATAATGTTTGTCCATTTCATGGATAAGAAGATCATAAAGATACCAGGTTTCACATTATTAGTGCTTATGACAGCAGTTCTAACTGCAACATTCACTCCATTGATCTCCATAGTGTATGATCCAACAAGGCCATATATTGTGAACCAAAGAAGGAACATTCAGCATCACCTTCCAAACACTAAGCTTTCAATGGTTCTATGCATTCAAGATGATGAAAGCATAAATGGTCTCATCAATGTTCTTGACATATCAAATCCAAATCCAAATCGTCCCTTCATAGTTCACACTGTTCGATTATTCGAGCTTGTTGGCCGTGCTAGCCCTCTATTTATAGACCATGACAACCAAGAAATGCCTTCCAATTATCAATGGATGCACATTGTAAATGTTCTAAGGCGCTATCAAGAACTTAAAGGGAAATTTGTGGAGCTAAAGTTTTTCACAGTTGTTTCGCTGAAGCAAATGATGTTCCAAGACATTTGCTTGATTGCTTTAGAAAATGAAGCTTCTCTGATCATCTTACCTTTCAAGAAAAAACATGTTTATAACAAGGGCATGATCCATACTATAAACTCTCAAGTGTTGAATCATGCACCTTGCTCTGTTGGTATTCTTGTTGATAAAGGAAGTAATAATCTTATTGAAATGATGACTGCAGCAAGAAATATTGCTGCTGCTCCTTCTTCCCTTCGTAGATTCGGACGGCGATATGCGATGCTATTTCTCGGAGGAGCAGATGCAAGAGAGGCTCTTGTTTATGCAGATATGATAGCTGCAAACCAAGATGCTTCTCTTACTGTGATTCGATTCTTGTCCGCAAACTATGTAGGGGACAAAGAAAGGGAGAAGAAGCTAGATGATGGAATTGTGACATGGTTTTGGGTTAAGAATGAGACAAACAACAGAGTGAAGTACAGAGAAGTGGTGGTTAAGAATGGAGAAGAAACAATTGCAAGTATTCTAGCTATGAATAATAATGATAATGATGGTGATGAAGATTATGATCTTTGGATAGTTGGAAGAAAACAAGGGATAAACCCTGTTCTTCTTACAGGGTTATCAGAATGGAGTGAGAGTGAAGAATTAGGACTCATAGGAGATTATATTGCTTCTGAAGATTTTCCAAGTTCTGGTTCTGTTTTAGTTATACATCAACAAATTGTAAGAGGATAA 4332 0.4294 MRVWPVLLILLLQFVEPSHGQTKSQQNNTGFQCSGRSYPCQAYAFYRAQSQFLDLASIGDLFQVSRLMIANPSNISSNSVSSPLILNQQLFIPLTCSCNSINTTFGSISYANISYTIKPNDTFYLVSTNKFENLTTYPSVEVVNPNLVATNLQIGDNAIFPVFCKCPDKNTTVSNTRANYMISYVVQPSDNLSSIASRFGSQQKAITDVNGNKFNVYDTIFVPVTKLPVLSQPNTSTAAAPSPTPAGSSDDRAGTVRGLAIGLGIAGLLLMVVCAVWMYRESVLKGRMWAGRDEEEQRQKEGRVFSGGGDGKGSKPMDVKLMANVSDCLDKYRVFGIEELVEATDAFSDSCLIQGSVYKGTIDGETYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDSEEGNCYLVYEYVENGSLNWWLHEEEGKNKEKLNWKTRVRIGIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGREAIDEEGNLLWMSAMKTFEGVSSDQEKGRRVREWMDKAILRDTISMDSLLGVLGIAIACLHKEPSKRPSIVDVVYALCKSDDAGFETSEDGIGSPKVTARVFPIHDHHIRHSRTLIQSLKHIDDDSIATSLALSCQSMQEFRAGGLFNGGGNNHTASTFSLLMLDLILIIVVTRILRILFKPLKQPELVCQMMGGIILGPSVLGRHGWFKHNVMPEAAEFLVKNLGIMGFMFFVFIYGVKCDPTMLKKSGKMHLYTALVGISIPSMLTFLVSLYMRKNMDKELSRIASLGVISAYFGITTFPVVHNILKELNLINSHVGRMALSMALIGDAIGTCSIVVFEAGKHGETGTKHAIWYTISLVLVLMFIMFCVRPTMMWIHKNTPEGHPVEQSYVVVILLGVFVLGFVTDMLGMAIANGPLWLGLVIPDGPPLGATIVEKSKTIMTDFLLPFSFLMVGTHTDVFAMSEIDWSHLEPLFFMVLTGYLTKFFSTWVATFYWQLPFRDGLALSLMMSLRGQMELIMFVHFMDKKIIKIPGFTLLVLMTAVLTATFTPLISIVYDPTRPYIVNQRRNIQHHLPNTKLSMVLCIQDDESINGLINVLDISNPNPNRPFIVHTVRLFELVGRASPLFIDHDNQEMPSNYQWMHIVNVLRRYQELKGKFVELKFFTVVSLKQMMFQDICLIALENEASLIILPFKKKHVYNKGMIHTINSQVLNHAPCSVGILVDKGSNNLIEMMTAARNIAAAPSSLRRFGRRYAMLFLGGADAREALVYADMIAANQDASLTVIRFLSANYVGDKEREKKLDDGIVTWFWVKNETNNRVKYREVVVKNGEETIASILAMNNNDNDGDEDYDLWIVGRKQGINPVLLTGLSEWSESEELGLIGDYIASEDFPSSGSVLVIHQQIVRG 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00321 1443 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Aip01g00321 1443 ProSiteProfiles Protein kinase domain profile. 329 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00321 1443 Pfam Sodium/hydrogen exchanger family 701 1087 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip01g00321 1443 SMART serkin_6 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00321 1443 CDD LysM 182 222 IPR018392 -
Aip01g00321 1443 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Aip01g00321 1443 Gene3D - 694 1096 IPR038770 -
Aip01g00321 1443 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 666 1442 - -
Aip01g00321 1443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Aip01g00321 1443 Gene3D LysM domain 181 223 IPR036779 -
Aip01g00321 1443 SMART LysM_2 114 161 IPR018392 -
Aip01g00321 1443 SMART LysM_2 183 223 IPR018392 -
Aip01g00321 1443 SUPERFAMILY Protein kinase-like (PK-like) 335 611 IPR011009 -
Aip01g00321 1443 Pfam LysM domain 184 221 IPR018392 -
Aip01g00321 1443 MobiDBLite consensus disorder prediction 291 305 - -
Aip01g00321 1443 ProSiteProfiles LysM domain profile. 182 229 IPR018392 -
Aip01g00321 1443 PANTHER CATION/H + ANTIPORTER 666 1442 - -
Aip01g00321 1443 MobiDBLite consensus disorder prediction 291 312 - -
Aip01g00321 1443 Pfam Protein kinase domain 355 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00321 Aip-Chr1 3459064 3466999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00321 634 1440 Antiporter Super Family AT5G37060 40.095 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip01g00321 Na_H_Exchanger 2.6e-40 CL0064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00321 - - ahf:112793168 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00321 01 3459064 3466999 Aip01g00321 01 3459064 3466999 ECH