Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00317 ATGTTTAGTTTGGTCTCAAGTGTTGCATTTGCTATAATGTTCTTGAGTTTGTCAAGGCAAGTTGACTTTGGATTCGAGGTAGATCTCTTCAACTTCTTCCTTGGATACTTTTTAGTTCAACTCATGAAAATTCACATTGCTCTCATTTTTTTGGGTGCTTCAATATGCTATTTTTTCACGTGTCTTCGCTCTTACTTGGATAACAAGCAACCACTGAATGGGAGTAATGTCGCCCATTCAGTGGTGCAAATCGCATTGGAAATTGAAGATGGGAGAAATACAGTAAATAAAAAAGAAAATTTATATTTGATTCTTGGAATAGAGGAGAAAAGAGAAGACATGGTGATTTTTCCCATTGATATGGAAGAAAAGATTCGGACGGCGATTTTCGAAAAAGCAGGGTATGATGAAGAATGCTACAATGTATACCTAACTTGGAGGAGACAAATCCTTGCTGAGAAAATGAGGAAGATAGATATGCAAAAGCTTCTCATAAAGGAGATCAAAGGTGTTCCATTAGATTACTTGCAGAAAAAGATTCAACGCTGGATCATGTCTTTTGAATATTCTATCAGGATTCTGTTCTCTGAAGAAAGGAATCTAAGTAACTCTGTTTTTGTGGAGTGTTCTTCTAGTTCAAACTATGCTGATCTCTGTTTTATGGAGCTATGCAGGGCACCAATGACTCTGCTACTAGATTTCGCTAACGCAGTGGCGAACAGCGCAGGCTCGCCATTGCGATTGTTTAGGCTGCTCAAGGTATTTGAGGCATTGAAAGAAATGTTACCTGAGATTGAAACATTGTTCTCTGATGAATGTGGCGGCGTGGCAATAAGGGACGAAGCGATTGGAATCTTGGCAAGGTTGAGGGAAGCAATCAGAAGTGTTTTCGCCGATTTGGAGACTCTGATATGCAAGAATGAAATTTCAGTTGGGATTGTTAATGGTGGAGGGATTCATCCAATCACTTATTATGTAATGAACTACCTTGGTGCTGCTTGTAAATCTTTGATGACATTGGAGCAGGTTTTTGAGAACAATAACAATAATCATGGAGTGGAATTTTATTTGGCTAGGATTTTGTTGTTGTTGGAGCAGAGTTTGAAGGCTAAATCAAAAGAAATGTACAAGGATTCAACTTTAGGGTTAGTTTTCTTGATGAACAATTACACCTACATGGTTAACTGTGTGAAACATAGTAAACTAGGAGAGTTGTTAGGTGAAAATTGGATCAAGAATCACATTGTAGCAAAATTTCGCCAATGTTTTAAAATTTACAAAGCAAATTCATGGGATCAAGTATTCAGAGGGAAGCTTATTAGTGAGTTTGTGTTGAAGTTTGTGGAGATATGTGATGTGCAATCATGTTGGATTATCTTTGATGATCACCTAAGAAGGAAAATTAGAAATAACTTGAAAGAAACATTGTTGGCAAGGTTCAAAAGTGTTATAGAAGGGTCACAAGAAAACATTAATATTTGTGGTGACTTTGGGTTTGGGGTCAGAGATATTGTGGCTGGAATAGACAAGTTGTTTAAGGGAAGAGATGAGCTCAAAAATCACAGAGAGATTCATCCTACATGGACTACAGCCTTGCATGAGCACAATATCAAGGATTTTCATAAACATTGGAAGAAGCATGGCCAGAAAACATTCATTGGTTCTTCATATCCAATGTAA 1680 0.3738 MFSLVSSVAFAIMFLSLSRQVDFGFEVDLFNFFLGYFLVQLMKIHIALIFLGASICYFFTCLRSYLDNKQPLNGSNVAHSVVQIALEIEDGRNTVNKKENLYLILGIEEKREDMVIFPIDMEEKIRTAIFEKAGYDEECYNVYLTWRRQILAEKMRKIDMQKLLIKEIKGVPLDYLQKKIQRWIMSFEYSIRILFSEERNLSNSVFVECSSSSNYADLCFMELCRAPMTLLLDFANAVANSAGSPLRLFRLLKVFEALKEMLPEIETLFSDECGGVAIRDEAIGILARLREAIRSVFADLETLICKNEISVGIVNGGGIHPITYYVMNYLGAACKSLMTLEQVFENNNNNHGVEFYLARILLLLEQSLKAKSKEMYKDSTLGLVFLMNNYTYMVNCVKHSKLGELLGENWIKNHIVAKFRQCFKIYKANSWDQVFRGKLISEFVLKFVEICDVQSCWIIFDDHLRRKIRNNLKETLLARFKSVIEGSQENINICGDFGFGVRDIVAGIDKLFKGRDELKNHREIHPTWTTALHEHNIKDFHKHWKKHGQKTFIGSSYPM 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00317 559 SUPERFAMILY Cullin repeat-like 129 483 IPR016159 -
Aip01g00317 559 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 129 512 - -
Aip01g00317 559 Pfam Exo70 exocyst complex subunit 181 483 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip01g00317 559 Gene3D Exocyst complex component Exo70 98 522 - -
Aip01g00317 559 PANTHER EXOCYST COMPLEX PROTEIN EXO70 129 512 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00317 Aip-Chr1 3436641 3438569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00317 133 514 EXO70 exocyst subunit family AT5G58430 41.646 1.82e-84 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00317 K07195 - aip:107644445 1033.09