Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00316 ATGGGTTGCAAAGCTATAACCAAGATAAATATCTACATCGCAAGCTTTATTCCAGACACTAAAATGGCTGACAGCGGGGAAGAGAAGTTACTTGCTGTGGCGCGCCACATAGCGAAGACGCTGGGGAACGACAATCGAACCGTTGCAGAAGACATTCTCAAAATATTCTCAAACTTCGATGCTCGATTCTCCAAGGAGAAGCTTTCTGATCCACTGGGCTGCGCCGCACTGGAACAGACCCTCGACTCACTCGATGAACGCATCTCGCGCCACGTGTCCTCACGCAACAACAACGACAACAGCCAGGCAATCTTTTCCGTCAACACCGCCGCGTTCCTCGCTTCGGTCGACGAGCTCACCGCCACCGTCAACAGATGGAGGCCTCTCGCCGCGGATGAGACCGTTGGCGCGTGCCTCTCACGTGCTGACGAGATGCTCCGTCGGGCTATGGTCCTAGCAGAAGACGAGTTCCGGTCACTCATGGATGAGTCAATTCGGAATACGTCGTTTGAATCGGATGACGGAGGCGAATTTGAAGGAGACGATGAGAGTTGCGGCAACGGCGTTCAGGATCATCGAATTCCAGCGGCGGAACGGGTTTCTGAGGAGGATGTGGTGATTGATGTGTTGCCAGCGGGTACGGTGATCGATCTCCGGGAGATAGCGACGCGCATGGTGGCGGCGGGGTTCGGCGACTCGTGCGCGCGCGTGTACGGTGGTTGCCGGAGGGAGTTCTTAGAAGAGAGCTTCTCGAGGTTAGGGTTTCGGAATCTTTGCGCTTCGGAGATTCAGGAGATGCCATGGCAGGTTCTTGAAGACGAGATCGAGCGTTGGATCAACGCCTCCAACGTCTCACTCAGGATCCTTTTCCCCAGCGAGCGCCGGCTGTGCGATCGCGTATTCTCCGGCGGTTCCGCCGCCGATATCGCGTTCGGTGAGGTCTGCCGCGAACCTGTGACACAACTGCTGAGGTTTGCCGACGCCGTCGCCAGTCACAGCCGCTCGCCGGATCAGTTGTTCCGAATCCTCCACGTGTTCGACACAATGCGTGAACTAATTCCTGAATTCGCATCGCTCTTCTCTGATTCACAATGTGAGACTGAAGCAATTGAAGTTTGGAAGCGATTGGGGGAAGCGATCAAGGAAATTTTTGTGGAATTGGAAAACCTGATTCGCCATGATCCGGCAAAGGCGGCAGTTCACGGCGGTGGGCTTCACCCTATCACTAAATATGTAGTGAATTACCTTGTGGCCGCGTCCCAGTCACGGCGAACCTTGGAACTAGTTTTCCAAGGCGATTTTCTTCCATTGAAGGATTTCATCACTAAGAAGGCGAAAACCAGCGAATTGGGTCCCGTTTTAGGTGATGATTGGATCCGAAAGCACACTGCGAAAATTCGGAGATTTCATGTGAGCTACCAGAGGAGTTCATGGAGCAAGGTGGTGGGGTTCTTGAAGGTTGAGACAAGTGAGGTGACAATGGCAGCAGGGTCTAGTGTCGTTGTTGAGCTTAGGGAGGAAATCAGAATTGCACTGGAGAAGATCTTGTTGCCTGCCTATGGAAGCTTCATTGGAAGGTTCCATAATGTTCCGGAACTCAGCAAGTACGTTGACAAGTATGTAAAGTATGGGGTGGATGACATTGGAGATCGGCTTAACGATTTGTTTCAGGGAGAAAACAGCGTATTAGAAGTTTCACATCGCTTTAAGATATGGCTATGA 1722 0.5238 MGCKAITKINIYIASFIPDTKMADSGEEKLLAVARHIAKTLGNDNRTVAEDILKIFSNFDARFSKEKLSDPLGCAALEQTLDSLDERISRHVSSRNNNDNSQAIFSVNTAAFLASVDELTATVNRWRPLAADETVGACLSRADEMLRRAMVLAEDEFRSLMDESIRNTSFESDDGGEFEGDDESCGNGVQDHRIPAAERVSEEDVVIDVLPAGTVIDLREIATRMVAAGFGDSCARVYGGCRREFLEESFSRLGFRNLCASEIQEMPWQVLEDEIERWINASNVSLRILFPSERRLCDRVFSGGSAADIAFGEVCREPVTQLLRFADAVASHSRSPDQLFRILHVFDTMRELIPEFASLFSDSQCETEAIEVWKRLGEAIKEIFVELENLIRHDPAKAAVHGGGLHPITKYVVNYLVAASQSRRTLELVFQGDFLPLKDFITKKAKTSELGPVLGDDWIRKHTAKIRRFHVSYQRSSWSKVVGFLKVETSEVTMAAGSSVVVELREEIRIALEKILLPAYGSFIGRFHNVPELSKYVDKYVKYGVDDIGDRLNDLFQGENSVLEVSHRFKIWL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00316 573 Pfam Exo70 exocyst complex subunit 276 432 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip01g00316 573 Pfam Exo70 exocyst complex subunit 440 490 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip01g00316 573 Pfam Exo70 exocyst complex subunit 502 554 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip01g00316 573 MobiDBLite consensus disorder prediction 169 188 - -
Aip01g00316 573 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 440 557 - -
Aip01g00316 573 Gene3D Exocyst complex component Exo70 439 563 - -
Aip01g00316 573 Gene3D Exocyst complex component Exo70 88 435 - -
Aip01g00316 573 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 51 431 - -
Aip01g00316 573 PANTHER EXOCYST COMPLEX PROTEIN EXO70 440 557 IPR004140 GO:0000145|GO:0006887
Aip01g00316 573 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 431 IPR004140 GO:0000145|GO:0006887
Aip01g00316 573 SUPERFAMILY Cullin repeat-like 106 556 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00316 Aip-Chr1 3419086 3421164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00316 22 561 EXO70 exocyst subunit family AT5G58430 48.408 0.0 549
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00316 01 3419086 3421164 Aip01g00316 01 3419086 3421164 ECH