Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00310 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAGATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGAAACCAACTGCAAGCATACAAGCAAGACAATTTGTTGCCTTCTAG 507 0.4398 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKKPTASIQARQFVAF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00310 168 Gene3D - 12 77 - -
Aip01g00310 168 PIRSF GINS_PSF2 2 159 IPR007257 GO:0005634|GO:0006260
Aip01g00310 168 SUPERFAMILY GINS helical bundle-like 73 149 IPR036224 -
Aip01g00310 168 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 154 IPR007257 GO:0005634|GO:0006260
Aip01g00310 168 CDD GINS_A_psf2 66 157 - -
Aip01g00310 168 SUPERFAMILY PriA/YqbF domain 12 71 - -
Aip01g00310 168 Gene3D - 78 163 - -
Aip01g00310 168 Pfam GINS complex protein 54 148 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00310 Aip-Chr1 3336147 3339706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00310 1 146 Core DNA Replication Machinery Family AT3G12530 71.233 3.29e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00310 K10733 - gmx:100780528 275.404