Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00306 ATGGCAAATAACAATGCAACTACACTCTCACTTGAGATGAAGGATGTTGTGATCATTAAACCTTCCAAACCAACACCTTCTTGTGTTCTTTCTCTATCAAGCATTGACAACAATCCTGAGCTCAACGTTCTCTGTCACATCATTTATGCATACCAAGCAAATCTTGATGACCCAAAAGGCCAATTACTATTAGATCCTTGTCATGTGATAAAACAAGGCATTTCAAAGGCTTTGGTTTACTATTACCCTCTTGCAGGTAAGATAATAACAAATAATGGTGGTGATGGAAGACTTGGAATCAAGTGCAATAATGTTGATGATGGAGTTCCATTCTTGGAGGCAGATGCTAATTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACAGCACAGAAATTGGTGTTTGATTATGACAACCCTTCTCTTCATCATGATCAAACTAGTCAACATCCCTTGGTTTTCAAGtga 480 0.3792 MANNNATTLSLEMKDVVIIKPSKPTPSCVLSLSSIDNNPELNVLCHIIYAYQANLDDPKGQLLLDPCHVIKQGISKALVYYYPLAGKIITNNGGDGRLGIKCNNVDDGVPFLEADANCELSSLHYLEGIDVPTAQKLVFDYDNPSLHHDQTSQHPLVFK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00306 159 PANTHER ACYL TRANSFERASE 4 5 159 - -
Aip01g00306 159 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 159 - -
Aip01g00306 159 Gene3D - 6 159 IPR023213 -
Aip01g00306 159 Pfam Transferase family 10 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00306 Aip-Chr1 3295380 3296156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00306 9 115 Monolignol Biosynthesis Gene Families AT5G48930 33.028 6.34e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00306 K20240 - gmx:100801843 199.519