Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00302 ATGGGATATGAAAAACCATTCCTTGACCTTAAGGTTAGCATGGAAGATGTTATCTTTGTAAAGCCATCAAAACCAACTCCTTCATCTGTAATCTCTCTATCCACAATTGATAATAGACCAGAACTTAATAGTCTATGTCAAACCATTCACATATTTAAACCACCAAATAACACTATTCTTATTGATGATCCTCAAAATGCCCAAAATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAAGGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAATCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGATGGTAGTGACACTGAAAATGCAAAACACTTGGCTTTTGATAATCCTTTTCATGAAGATGATGATGAAAATGGTTACCAATATCCCTTGGGAATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATAGGCGCATCACATGCTGTTTTTGATGGAATTGGAGGATCTCAATTCTTTCAAGCCATGGCTGAACTCGCGAGCGGAAAAAGCGAGCCATCTGTGAAACCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAATTACTGAACATCCATTGCTAAGTCCCATGGATGAGGCGTCGGCCGCGGTTTCACCTTACTTGCCCACCAAAACTCTCGTGCATGAATGTTTTAAGGTGGATAGTGAGAGCATAAAAAGACTCAAAAAGAGTTTATTGAAGGAAATAAGTTATAGCAATAATATTGATTACTCTTTGGAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCAAGAACTAGAGCTTTGAAACTCAACTATGATGGAAAAACTTCATTGGCTATTGTTGTAGGGTTAAGAAGGAATCACTCCTTGATTCCTCCTTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGACCCAAAAGTTGTGCTAACAGTAAAGGAACTCAATGAAAAGCCACTCTCACATGTGGTGAAGATGATCAAAGAGACTAAGAAGCTTGGTTTCTCAAAGGAGTATATTAGGAATGCTATTGACACAAAAGAGACAAAAATAGAGCACTTTGATTATCAAGGTATCGGTGCATCTATGGTTTTGTCTAGTTGGATGCACTTGGGTATGTTGGAAAACATGAACAAAGGGTGGGCTAAGCCAGTGAACATGGTACCGGCACCATGCAACATGTTTGGGACAGTTGGAGTGTGCATTTTTTCACCTCCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGAATCTTTGTTTCTCTACCTAATGATGCTATGCCCATGTTCAAGGAGGAGATGGAAGCTCTCATGCTTGTTAAACCATAG 1422 0.4051 MGYEKPFLDLKVSMEDVIFVKPSKPTPSSVISLSTIDNRPELNSLCQTIHIFKPPNNTILIDDPQNAQNDPALVIKEALSKALFYYYPLAGRLVKHADGKLRIHCNAYGVPFVESIANCKLSCLHYLDGSDTENAKHLAFDNPFHEDDDENGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGIGGSQFFQAMAELASGKSEPSVKPVWERERLNGSITEHPLLSPMDEASAAVSPYLPTKTLVHECFKVDSESIKRLKKSLLKEISYSNNIDYSLEGESFTSFEALGAYVWRSRTRALKLNYDGKTSLAIVVGLRRNHSLIPPLPEGYYGNAFVDPKVVLTVKELNEKPLSHVVKMIKETKKLGFSKEYIRNAIDTKETKIEHFDYQGIGASMVLSSWMHLGMLENMNKGWAKPVNMVPAPCNMFGTVGVCIFSPPSDLDPSMNGGVRIFVSLPNDAMPMFKEEMEALMLVKP 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00302 473 Gene3D - 7 226 IPR023213 -
Aip01g00302 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 469 - -
Aip01g00302 473 PANTHER ACYL TRANSFERASE 4 7 469 - -
Aip01g00302 473 Gene3D - 228 465 IPR023213 -
Aip01g00302 473 Pfam Transferase family 11 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00302 Aip-Chr1 3265517 3266938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00302 10 463 Monolignol Biosynthesis Gene Families AT5G48930 26.923 1.00e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00302 K20240 - gmx:100801843 522.316