Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00301 ATGGCACATCATCAAATTGCATCCTTCAAAATCGAAAACAAAGATGTTGAATATGTGAAACCATCGAAACCTACTCCTTCCACTACACTTTCTCTATCCACAATTGATAATAGGCCTGAATTCCTTCCCCTAAGTCAAGTCATTCGTGTATACCAATCACAAAACAACAACACCACAAAGAAAATTTATTATTCCAAAAATGACCCTGCAATTGTGATCAAAGAAGCACTATCAAAGGCTTTGGTTTATTACTACCCTCTTGCTGGCAAGCTAGTGAAGCATCATAGCAACAACAATGGGAAGGTAACAATCAATTGCAATGAAGATGGTGTTCCATTTGTAGAAGCAATTGCAAATTGTGACCTTTCTTCACTCAATTATCTTGATTTGAGTGACATTGGAATTGCCAAAAATTTTGTGTATGATCCACCTTTTCATCAAGATGAAAATGGTAACCAACTAATATACCCTATGGTGGTGAAGGTGACTAAATTTCAATGTGGAGGGTTCACATTAGGGTTAGGGGAACCACACACCATTGCTGATGGGGTTGGTTCCATCAAGATCTTTCAAGCCATAGCCGAATTCGCCACCGGAAAAAGCGAGCCTTCGGTGAAGCCTGTGTGGGAAAGGGAGAGGCTAAATGGGTCAATAACCAAAACTCCATTGCTAAGTCCCATGGATGGAGCTTCGGCCGCCGGTTCGCCATATCTACCTTCCAAAACCCTAGTTCATGAATGTTTTAAGGTGGGTAGTGAGAGCATAAAGAGACTCAAGTTGAATTTGGCAAAGGAAATTGTTGATAACAATGTTCCAATTACAAATGAAGAATTAAGCTTTACAAATTTTGAGTCTCTTGCTGCTTATGTTTGGAGGGCAAGAACTAGGGCATTGAAATTGAACTATGATGGTAAAACTATGCTGAAATTTGCGGTAGGTATAAGAAGGCACATAGATCCTCCTTTGCCTGAAGGGTATTATGGTAATACCATTGTGGATGCAGATGTTGTGATGCCGGTCAAAGAAGTCAACGAAAGACCACTCTCACAAGTGGTGAAGGTTATTAGAGAGTTCAAGAAGGTTGCTTTCACAAAAGAATTCATTAAGAATTCAATTGATACATTGGAGACAAGAGTTGAGGAGTTTGATTTTGATGGGAATGGTTCATGCATGGCTTTGGCTGAGTGGAAGCATTTGGGATTCTTGAGAAACATGGATTTTGGGTGGAAGGAGCCTGTGAATGTGATACCTGCCCCATGTAACATGTTTGGGGAAGTGAGTATTTGCATCTTCTTTCCTCCTTGTGACATGGATACTTCAATGAGTGGAGGTGTTAAGATCTATGTCTCACTCCCCATTGATGCCATGCCCAAGTTTAGGGAGGAGATGAAAGCACTTGCAATTACTATTAGTTAA 1416 0.4032 MAHHQIASFKIENKDVEYVKPSKPTPSTTLSLSTIDNRPEFLPLSQVIRVYQSQNNNTTKKIYYSKNDPAIVIKEALSKALVYYYPLAGKLVKHHSNNNGKVTINCNEDGVPFVEAIANCDLSSLNYLDLSDIGIAKNFVYDPPFHQDENGNQLIYPMVVKVTKFQCGGFTLGLGEPHTIADGVGSIKIFQAIAEFATGKSEPSVKPVWERERLNGSITKTPLLSPMDGASAAGSPYLPSKTLVHECFKVGSESIKRLKLNLAKEIVDNNVPITNEELSFTNFESLAAYVWRARTRALKLNYDGKTMLKFAVGIRRHIDPPLPEGYYGNTIVDADVVMPVKEVNERPLSQVVKVIREFKKVAFTKEFIKNSIDTLETRVEEFDFDGNGSCMALAEWKHLGFLRNMDFGWKEPVNVIPAPCNMFGEVSICIFFPPCDMDTSMSGGVKIYVSLPIDAMPKFREEMKALAITIS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00301 471 Gene3D - 238 463 IPR023213 -
Aip01g00301 471 PANTHER ACYL TRANSFERASE 4 4 467 - -
Aip01g00301 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 467 - -
Aip01g00301 471 Gene3D - 5 223 IPR023213 -
Aip01g00301 471 Pfam Transferase family 10 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00301 Aip-Chr1 3244007 3245422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00301 10 430 Monolignol Biosynthesis Gene Families AT5G48930 27.416 3.29e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00301 K20240 - gmx:100783730 471.855