Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00300 ATGCCACCTCTCATTGTTGAAATGAAGGATGTTGTATTTATCAAACCATCTAAGTCTACACCTTCCTCTGTTCTCTCTCTATCTACACTTGATCATAGACCTGACCTTAATATGTTATACCATATCATTCAAGTTTACAAATCACAAAAACATGATGGTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATAAAAAAATCACTCTCAAAGGCCTTGTTCTATTACTACCCTCTTGCCGGTAAGATAGTCAAACATGATGATGGGAAGTTTAGAATCCATTGCAATTCCAATGATAGAGTTCCATTTATAGAAGCAATTGCTAATTGCAATCTCTCTTCTCTTAATTACCTTGATGATGGTAGTAGTGATGACATGGAAATTGCAAAACAATTGGCCTTTCAGCTTCCTTCACTAGGTGATGAAAATGGCCACCAATACCCTTTAAGGTTCAAGGTGACCAAGTTTCTATGTGGGGGATTCACAATTGGAATTGGGATCTCACATATTTTATGTGATGGATTTGGATTATCTCAATTTCTTCATGCCTTAATCGAGTTAGCAAGAGGAAGAAACGAGCCATCAATAAAACCTGTTTGGGAAAGGGAGAGGCTGATGGGGTCAATTACCGAAATACCCTTGCCGAGTCCGATCAATAATGCCTCGGCCGCAGTTTCACCACATCTTCCGGCCACGACACTCGTGCATGAATGCTTTAAGGTGGATGGTGAGAGTATAAGAAGACTCAAAATGAGATTGATCAAAGAATATACTAGTCACAATAATATTAAGACTATGAAAGAAATTTTCACTAATTTTGAATCACTCACTGCTTATATTTGGAGGTCAAGGGCTAGAGCCTTGAAACTAAACCATGATGGAAAAACTTTGCTAGGTATAGTAGTTGGGGCGAGAAGACATTTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTTTCAGTTAAAGAACTCATGGAGAAACCTCTCTCACAAGTTGTGAAGCACATCAAAGAGATCAAGAAAGCTGCTTTTACTAGAAACTATATCACGGATTCAATTAACACTTTGGTGACAAAAGAACAAGATTTTAATGTGGAAGGTATTGGTGCATATTTTAATGTGACCGATTGGAAATATTTGGGTTTCTTGGAAAACATGGATTTTGGAGGGAATGTTCTAGTGAATTTATTACCAGCACCATGCAACATGTTTGCCATGGTGGATTTGTGCATTTTTGCACCTCCTAGCAAGTTGGATTCATCAATGAAAGATGGAGGAGTTAGGATTTTTGTGTCTCTTCCTAATGATGCCATGCCCAAGTTCAGAGAGGAGATGGAAGCTCTTATACTTCTTAATAATATTTGA 1398 0.382 MPPLIVEMKDVVFIKPSKSTPSSVLSLSTLDHRPDLNMLYHIIQVYKSQKHDGYPNDQIDPNPINVIKKSLSKALFYYYPLAGKIVKHDDGKFRIHCNSNDRVPFIEAIANCNLSSLNYLDDGSSDDMEIAKQLAFQLPSLGDENGHQYPLRFKVTKFLCGGFTIGIGISHILCDGFGLSQFLHALIELARGRNEPSIKPVWERERLMGSITEIPLPSPINNASAAVSPHLPATTLVHECFKVDGESIRRLKMRLIKEYTSHNNIKTMKEIFTNFESLTAYIWRSRARALKLNHDGKTLLGIVVGARRHLDPPLPEGYYGNAIVDANVVLSVKELMEKPLSQVVKHIKEIKKAAFTRNYITDSINTLVTKEQDFNVEGIGAYFNVTDWKYLGFLENMDFGGNVLVNLLPAPCNMFAMVDLCIFAPPSKLDSSMKDGGVRIFVSLPNDAMPKFREEMEALILLNNI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00300 465 PANTHER ACYL TRANSFERASE 4 2 460 - -
Aip01g00300 465 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 460 - -
Aip01g00300 465 Gene3D - 230 456 IPR023213 -
Aip01g00300 465 Pfam Transferase family 6 458 - -
Aip01g00300 465 Gene3D - 4 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00300 Aip-Chr1 3218042 3219439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00300 6 454 Monolignol Biosynthesis Gene Families AT5G48930 26.237 7.29e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00300 K20240 - gmx:100801843 486.878