Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00299 ATGGCACCTCTCATTGTGGATATGAAAGATGTTGTATTTATCAAACCATCTAAGTCTACACCTTCCTCTATTCTCTCTCTATCTACACTTGATCAGAGACCTGACCTTAATATGTTATGTCATATCATTCAAGTTTACAAATCACAAAAACATGATGTTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATAAAAAAATCACTCTCAATGGCCTTGTTCTATTACTACCCTCTTGCTGGTAAGATAGTCAAACATGATGATGGGAAGTTTAGAGTTCATTGCAATTCCAATGATAGAGTTCCATTTATAGAAGCAATTGCTAATTGCAATCTTTCATCTCTTCATTACCTTGATGGTATTGATGACATGGAAGTTGCAAAACAATTGGCCTTTGAGCTTCCTTCACAAGATGATGAAAGTGGACATCATTACCCTTTAGGGTTCAAGGTAACCAAATTTCTATGTGGAGGATTCACAATTGGAATTGGGGTCTCACATGTTGTATGTGACGGATTTGGAGTCTCTCAATTTCTTCATGCCATAATTGAGTTAGCAAGAGGAAGAAATGAGCCATCAATAAAGCCTGTTTGGGAAAGGGAGAGGTTGATGGGGTCAATTACCGAAATGCCCTTGCCGAGTCCTATCGATGATGCCTCGGCCGCCGTTTCACCATATCTTCCAACCACAACACTCGTGCATGAATGCTTTAAGGTGGATGGAGAAAGTATAAGAAGACTCAAAATGAGATTGATCAAAGAATATACTAGTCACAATAATATTAAGACTATGAAAGAAATTTTCACAAATTTTGAGTCACTCACTGCTTATATTTGGAGGTCAAGGGCTAGAGCCTTGAAACTAAACTATGATGGGAAAACTATGCTAGGCATATTAGTTGGGGCGAGAAGACATTTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTTTCAGTTAAAGAACTCATGGAGAAACCTCTCTCACAAGTTGTGAAGCACATCAAAGAGATCAAGAAAGTTGCTTTTACTAGAAACTATATCACGGATTCAATCAACACTTTGGTGACAAAAGAACAAGATTTTAATGTGGATGGTATCGGTGCATATTTTAATGTGACCGATTGGAAACATTTGGGTTTCTTGGAAAACATGGATTTTGGAGGGAATGTTCTAGTGAATTCTTTACCAGCACCATGCAACATGTTTGCCGCAGTGGATTTGTGCATTTTTGCACCTCCTAGTAAGTTGGATTCATCAATGAAAGATGAAGGAGTTAGGGTTTTTGTGTCTCTCCCTAATGCTGCCATGCCCAAATTCAGGGAGGAGATGGAAGCTCTTAGTCTTCTTATTAGTAGCATTTGA 1395 0.3857 MAPLIVDMKDVVFIKPSKSTPSSILSLSTLDQRPDLNMLCHIIQVYKSQKHDVYPNDQIDPNPINVIKKSLSMALFYYYPLAGKIVKHDDGKFRVHCNSNDRVPFIEAIANCNLSSLHYLDGIDDMEVAKQLAFELPSQDDESGHHYPLGFKVTKFLCGGFTIGIGVSHVVCDGFGVSQFLHAIIELARGRNEPSIKPVWERERLMGSITEMPLPSPIDDASAAVSPYLPTTTLVHECFKVDGESIRRLKMRLIKEYTSHNNIKTMKEIFTNFESLTAYIWRSRARALKLNYDGKTMLGILVGARRHLDPPLPEGYYGNAIVDANVVLSVKELMEKPLSQVVKHIKEIKKVAFTRNYITDSINTLVTKEQDFNVDGIGAYFNVTDWKHLGFLENMDFGGNVLVNSLPAPCNMFAAVDLCIFAPPSKLDSSMKDEGVRVFVSLPNAAMPKFREEMEALSLLISSI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00299 464 Gene3D - 3 212 IPR023213 -
Aip01g00299 464 Gene3D - 229 454 IPR023213 -
Aip01g00299 464 PANTHER ACYL TRANSFERASE 4 2 458 - -
Aip01g00299 464 Pfam Transferase family 6 456 - -
Aip01g00299 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00299 Aip-Chr1 3203292 3204884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00299 6 398 Monolignol Biosynthesis Gene Families AT5G48930 27.119 7.06e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00299 K20240 - gmx:100801843 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00299 01 3203292 3204884 Aip01g00299 01 3203292 3204884 ECH