Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00296 ATGTCTTCTTCTTCATTTTCATCATCATCGTCAACTTCTTCTTCTTCATTATCATCATCATCAACAACTCTTCAATGGTTAAGTTTAGTAGGAATAATTTGGCTCCAATCCATAAATGGAACAAACACAAATTTTCCAGCATACTCTTCCCAACTCAAAGAGCTTCTCTCAATCTCCCAAATCCAACTCAACAACCTTGCTTTTGCCTCAGATGCTGGAAAACTCTTTGGTTGGTTCTCTGGCCTTGCTTCTCTCTACCTTCCCCTTTGGCTTGTTCTAATCATAGGTTCAACTCTTGGCCTCATTGGTTATGGTGTTCAATATCTCTTCCTAACTAACCATATCTCAAATCTCTCTTATTGGCATGTTTTCTTGCTAACTTTCCTTGCTGGCAATAGCATTTGTTGGATCAACACAGTTTGTTATGTTGTTACAATAAGAAATTTCTTGTCTCATAGTCAAGTAGCTGTTGGAATCACAACTAGTTACCAAGGTTTGAGTGCTAAGGTTTATACCAATGTTGTTGATGCTTTTTTCTCACCACAAAAGAACAAGGCTAGAGCATTTTTGTTGCTAAACTCTGTTTTGCCCTTGGCAATAGGGTTAATTGTAGCTCCTATTCTTAGACAAACCAAAGCCACATCAAATTCATCAAGTGATTATTATATTGGGTTTGGTGTGATTTTTGTGATCACAATTGCAACTGGGATTTATGCTGTGGTTAGTATTTTGGAATTTGTGTCTAGCAAAATTTCATCACTTGGGGTTTTAATTGGTATCTTAGTGTCACTTTTCTTGCCACTATTGGTTCCAATTTCATTCAAGATCAATCAATTAGTTAAATCATGGCATGAAAATAGGGAGAAGCTTAGAGTGTACCATTACACTCTAGAGGAGAATTACATCACCAATACTAATAATGATGAAGTCAAAGAGAGTGATGAAGAAGAAGAAAAAGAAGTGTGTGTTGTTAGAGAAGAAATTGGAGTGAATTTGATGGTCAAAAGAATAGACTTTTGGTTATATTTCTTTGTGTACTTTTTTGGTGCAACAATTGGTTTGGTTTTTCTTAATAACTTGGGACAAATTGCTGAATCAAGAGGAAGCTCTAACACTTCATCTTTGGTGTCTTTGTCTTCATCCTTTGGTTTTTTTGGAAGACTCATGCCATCTCTCATGGCAACTAGAACCACTGCATTTACATTCTCATTTAATGTAGAAAATAATGACCACAGATGTGTTGGTTGA 1248 0.3598 MSSSSFSSSSSTSSSSLSSSSTTLQWLSLVGIIWLQSINGTNTNFPAYSSQLKELLSISQIQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLIIGSTLGLIGYGVQYLFLTNHISNLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSHSQVAVGITTSYQGLSAKVYTNVVDAFFSPQKNKARAFLLLNSVLPLAIGLIVAPILRQTKATSNSSSDYYIGFGVIFVITIATGIYAVVSILEFVSSKISSLGVLIGILVSLFLPLLVPISFKINQLVKSWHENREKLRVYHYTLEENYITNTNNDEVKESDEEEEKEVCVVREEIGVNLMVKRIDFWLYFFVYFFGATIGLVFLNNLGQIAESRGSSNTSSLVSLSSSFGFFGRLMPSLMATRTTAFTFSFNVENNDHRCVG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00296 415 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 19 394 - -
Aip01g00296 415 Pfam Nodulin-like 25 272 IPR010658 -
Aip01g00296 415 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00296 Aip-Chr1 3162992 3164239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00296 20 393 Nodulin-like Gene Family AT2G30300 50.133 8.51e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00296 - - aip:107616135 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00296 01 3162992 3164239 Aip01g00296 01 3162992 3164239 ECH
Aip01g00296 01 3162992 3164239 Aip07g01302 07 20976798 20979114 PCT