Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00289 ATGGCTATCCACTCATCAAATAATAATTACTTCTACATTATGTTTACTTCTTCCCTATTATTTGGCATATGTTCATCTCAGCTAACATCAAATTTCTATGATTCAACATGTCCCAAGGCACTCTCTATAATCAAATCTGCAGTGGCCAGTGCAGTGGCGAAAGAGCATCGAATGGGTGCATCGTTGCTTCGTCTTCATTTCCATGATTGCTTTGGATGTGATGCATCAATTTTATTGGATGACACTTCAACATTTACCGGAGAGAAGACAGCTGCTCCAAATTTGAATTCTGTTAGAGGTTTTGATGTAATTGATAACATCAAATCTCAATTGGAGAGTGCTTGTCCTGGAATTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGATTCTGTTGTTTCATTGGGTGGTCCATCATGGAATGTTGGATTGGGCAGAAGAGATTCAACAAGTGCAAGCAAAGATGCAGCAACTAAGGATATTCCATCCCCTCTTTTGGATCTTAGTGGCCTCATAACTGCTTTCTCCAATAAGGGTTTCACCACTCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGACAAGCAAGATGCCAAATATTCAGAGGAAGAATCTACAATGAAACAAACATTGACACAAACTTTGCAACATCAATGAAATCAAATTGTCCAAGCAGTGATGGAGACAGCAACCTCACAGCACTTGATGTCACAACAAATGTGCTCTTTGACAATGCTTACTTCAAGAACCTTGTCAACAACAAAGGCCTTCTTCATTCTGATCAGCAGCTCTTTATTAGTGGCGGTTCCACTAACTCTCTTGTCACTAACTATAGCAACAGTTATTCAGCTTTCTTTGCTGACTTTGCTAGTGCTATGGTCAAAATGGGAAATTTAAGCCCTTTAACTGGTACAACTGGTCAGATTCGTGCCAATTGCACCAAAGTTAATTAA 960 0.399 MAIHSSNNNYFYIMFTSSLLFGICSSQLTSNFYDSTCPKALSIIKSAVASAVAKEHRMGASLLRLHFHDCFGCDASILLDDTSTFTGEKTAAPNLNSVRGFDVIDNIKSQLESACPGIVSCADILAIAARDSVVSLGGPSWNVGLGRRDSTSASKDAATKDIPSPLLDLSGLITAFSNKGFTTQEMVVLSGAHTTGQARCQIFRGRIYNETNIDTNFATSMKSNCPSSDGDSNLTALDVTTNVLFDNAYFKNLVNNKGLLHSDQQLFISGGSTNSLVTNYSNSYSAFFADFASAMVKMGNLSPLTGTTGQIRANCTKVN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00289 319 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601|GO:0042744
Aip01g00289 319 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PANTHER PEROXIDASE 20 319 - -
Aip01g00289 319 PANTHER PEROXIDASE 72-RELATED 20 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 ProSiteProfiles Plant heme peroxidase family profile. 27 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Aip01g00289 319 Gene3D - 31 315 - -
Aip01g00289 319 Gene3D Peroxidase, domain 2 163 298 - -
Aip01g00289 319 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00289 319 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00289 Aip-Chr1 3095943 3099673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00289 23 319 Peroxidase AT5G05340 62.791 1.68e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00289 K00430 - gmx:100818176 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00289 01 3095943 3099673 Aip01g00289 01 3095943 3099673 ECH
Aip01g00289 01 3095943 3099673 Aip07g01282 07 20559902 20563942 ECH
Aip01g00289 01 3095943 3099673 Aip07g01288 07 20729995 20733599 PCT