Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00286 ATGAGTAATTCTCAAATAATAATCCAATATTATTTTTTGGTTATTGTTGTTATGGTCACTACTAATTTGGGCACATGGGTGATCCCTACCAATGGCATGAACAATGATGGTAATGGAAGGCTCACTCACCATTTCTATAAGAAAACATGCCCTAAGGTGTTGCCAGTGATAAGGTCTGTGGTTGAAAAGGCAATAAAGAAAGAACCGCGCATTGGAGCTTCATTGCTACGTTTGCATTTTCATGACTGCTTTGTTAATCTAGGGGGTCCACACTTTGGTTACCATGTGCTCTTAGGAAGAAGAGACGCTAGAAGTGCAAGCAATGAAGCTGCAAATACAAGCCTTCCTTCCCCATCTTCAAGCTTCTCAGAGCTTCTCTCTAACTTCAAGTCTCATGGGCTGGGCCTTAAAGACCTTGTGGCCCTTTCTGGGGCCCACACTATTGGATTTGCTCAATGTTCCTCTTTTAGGGATAGGATCTACAATGACACCAACATTGACCCAAAACTTGCATCCTATTTGAAATTACAAAAGTGCCCTCAAAGTGGTGGAGATAGTAATTTGGCACCATTTGATTCCACTAATAAAATATTTGACAATGTCTACTACAAGCAATTGTTGGATAACAAGGGGCTTCTTCATTCTGATCAAGAACTCTTCAAGGGGAATAATAGTGAGAGTGATAGGTTGGTGAAGCTATTTACTAGGAATCCAGTTGCTTTTGCTAAAAGATTCGGACATTCTATGATCAAGATGGGTAACATGAAGCCTCTTACCGGAAATGAGGGTGAGATTAGAATTAATTGTAGAAAAGTTAATTAA 822 0.3978 MSNSQIIIQYYFLVIVVMVTTNLGTWVIPTNGMNNDGNGRLTHHFYKKTCPKVLPVIRSVVEKAIKKEPRIGASLLRLHFHDCFVNLGGPHFGYHVLLGRRDARSASNEAANTSLPSPSSSFSELLSNFKSHGLGLKDLVALSGAHTIGFAQCSSFRDRIYNDTNIDPKLASYLKLQKCPQSGGDSNLAPFDSTNKIFDNVYYKQLLDNKGLLHSDQELFKGNNSESDRLVKLFTRNPVAFAKRFGHSMIKMGNMKPLTGNEGEIRINCRKVN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00286 273 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Aip01g00286 273 ProSiteProfiles Plant heme peroxidase family profile. 52 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 Pfam Peroxidase 87 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PANTHER PEROXIDASE 72-RELATED 27 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PANTHER PEROXIDASE 72-RELATED 88 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 Gene3D Peroxidase, domain 2 116 252 - -
Aip01g00286 273 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 Gene3D - 41 89 - -
Aip01g00286 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 138 148 IPR019793 -
Aip01g00286 273 SUPERFAMILY Heme-dependent peroxidases 41 273 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00286 273 PANTHER CATIONIC PEROXIDASE 88 272 - -
Aip01g00286 273 PANTHER CATIONIC PEROXIDASE 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00286 Aip-Chr1 3061929 3065902 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00286 39 86 Peroxidase AT5G05340 50.000 1.89e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00286 K00430 - gmx:100812163 259.996