Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00283 ATGACACTTTTTCGTTCTTCTTCTTCTTCTTCTTTATTCCTTGTCTTTGTTCTTGTTCTTCTTGCTGGAACCTCTTCTTCAGCCCATCTACTTTCAGAGAATTTCTATTGTAGAAAATGTCCACAAGTTTTCAATGCTGTGAAATCTGTTGTTGAAGATGCTGTGGCCAAAGAACAACGCCTTGGTGCTTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTATTGATGGTTGTGATGGATCATTGTTATTGGATGATACATCAACATTCAAAGGAGAGAAGACAGCAGCAGCAAACAAAAACTCAGTGAGAGGGTTTGAAGTAATTGATGCAATCAAGTCAAAGGTTGAAGCTTTGTGCCCCGGTGTTGTTTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGACGCTGTTGTTATTCTTGGAGGGCCTTTTTGGGATGTGAAACTTGGAAGAAGGGATTCAAGAACAGCAAATTTCACAGCTGCCAACACTGGTGTAATTCCACCTCCCACTTCTAACCTTAGTACCCTAATTTCCAATTTTAAGTCACATGGCCTTGATGTCAAGGACTTAGTTGCCTTATCTGGGTCTCACACAATTGGGCAAGCAAGGTGTACAAGTTTCAGAGGTCACATATACAATGACACCGACATTGACCCTTCATTTGCCAAGTTAAGGCAGAAAAATTGTCCAAGGCAAAATGGCACAGGAGACAACAATTTAGCACCCTTAGACCTACAAACACCCACACATTTTGAGAACAACTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCACTTGTTAAGGCCTATAGTCAGAATAATAAGGCCTTTGCTTCTGACTTTGTTACTGGAATGATTAAGATGGGGAACATCCTGCCCTTAACTGGGTCAAAAGGTGAGATAAGGAAGAATTGCAGAAGAGTGAATTAG 981 0.4098 MTLFRSSSSSSLFLVFVLVLLAGTSSSAHLLSENFYCRKCPQVFNAVKSVVEDAVAKEQRLGASILRLFFHDCFIDGCDGSLLLDDTSTFKGEKTAAANKNSVRGFEVIDAIKSKVEALCPGVVSCADILAIASRDAVVILGGPFWDVKLGRRDSRTANFTAANTGVIPPPTSNLSTLISNFKSHGLDVKDLVALSGSHTIGQARCTSFRGHIYNDTDIDPSFAKLRQKNCPRQNGTGDNNLAPLDLQTPTHFENNYYKNLINKKGLLHSDQELFNGGSTDSLVKAYSQNNKAFASDFVTGMIKMGNILPLTGSKGEIRKNCRRVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00283 326 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Aip01g00283 326 ProSiteProfiles Plant heme peroxidase family profile. 30 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 CDD secretory_peroxidase 31 325 IPR033905 GO:0004601|GO:0042744
Aip01g00283 326 Gene3D Peroxidase, domain 2 169 305 - -
Aip01g00283 326 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Aip01g00283 326 PANTHER PEROXIDASE 72-RELATED 6 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 SUPERFAMILY Heme-dependent peroxidases 31 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip01g00283 326 Gene3D - 34 326 - -
Aip01g00283 326 PANTHER PEROXIDASE 6 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00283 Aip-Chr1 3016661 3020602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00283 31 326 Peroxidase AT5G05340 64.527 1.12e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00283 K00430 - gmx:100813384 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00283 01 3016661 3020602 Aip01g00283 01 3016661 3020602 ECH
Aip07g01282 07 20559902 20563942 Aip01g00283 01 3016661 3020602 ECH
Aip01g00283 01 3016661 3020602 Aip07g01286 07 20666882 20672714 PCT