Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00280 ATGGAGAGTAAATCAATTGTTCTGTTGGAAAGATATGAGTTAGGAAGATTACTAGGGCAGGGTACCTTTGGGAAGGTTTACTATGCACGGAGTGCGATAACTAACCAGAGTGTGGCTATTAAGATGATTGACAAAGATAAGGTTATGAAAACTGGGCGTGCCGAACAAATCACGCGCGAGATATCTGTTATGAGAAGGGCTAGGCATCCCAATATTATACAGCTTTTCGAGGTTATGGCCACCAAGACTAAGATTTACTTTGTTATTGAAATTGCTAAAGGTGGTGAACTCTTCGACAAGGTGTCCAAGGGAAAACTCAAGGAAGATGTTGCTCACAAGTATTTTAGGCAGCTAATCAATGCAGTAGATTATTGTCACAGTAGAGGCGTATACCACAGAGATATAAAGCCGGAGAACATTCTGTTGGATGAAAATGGGGACCTAAAGATATCTGATTTTGGGTTAAGTGCGCTCGCGGAGTCCAAGCGGCAGGATGGCCTACTCCATACACCTTGTGGCACCCCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTGCAAAAGCTGATATTTGGTCTTGTGGAATTGTTCTATTTGTCTTATTGGCAGAAGTATGCAGGTTGTTGAGAAAGATGCTGGATCCAAATCCTGAAACCAGGATTACTATTGCCAAGATTACAGAAAATTCTTGGTTTAAGAGAGGACCTAAAGCTAAGCACAAAAAACATGACGCAGAAACCACTAGCGTCTCTTCAGGTACAGTTTCTGATCTAAGTGATGAAGGTGAAGGTCTAGCAGCAGAAGCAAAGGAAGAACCAGTTGTGGCAACAAGTATAAATGCATTTGATATCATCTCCCTTTCTGCTGGTTTCGATCTTTCTTCATTTTTCGAAGACAGTTTTCAGAAAAGAGAAGCAAGGTTTAGTTCAAGACAACCTGCATCGGTCATCTTTTCCAAGCTGGAAGATGCTGCCAAGCGACTAAAGCTGAAGATAAAGAAAACAGCAGCTGGCTTGGTGAAATTGGATGGTTTAACCGAAGGTAGGAAGGGGGTTTTATCAATTGATGCCGAGATTTTCGAGGTTACTCCTATGTTCCATCTGGTGGAGGTGAAGAAATCCAATGGAGATACATTGGAATACCAGAAAATACTGCAAGAGGGTATAAGACCTGCACTTAAGGATATTATTTGGGTCTGGCAAAATGACCAACAGCAGCAACCACAAGAGCCAGAAGAACAGCCGCAGATAGATGACCAGCCGCCACAACCACCCGAGTCATAA 1296 0.4267 MESKSIVLLERYELGRLLGQGTFGKVYYARSAITNQSVAIKMIDKDKVMKTGRAEQITREISVMRRARHPNIIQLFEVMATKTKIYFVIEIAKGGELFDKVSKGKLKEDVAHKYFRQLINAVDYCHSRGVYHRDIKPENILLDENGDLKISDFGLSALAESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAEVCRLLRKMLDPNPETRITIAKITENSWFKRGPKAKHKKHDAETTSVSSGTVSDLSDEGEGLAAEAKEEPVVATSINAFDIISLSAGFDLSSFFEDSFQKREARFSSRQPASVIFSKLEDAAKRLKLKIKKTAAGLVKLDGLTEGRKGVLSIDAEIFEVTPMFHLVEVKKSNGDTLEYQKILQEGIRPALKDIIWVWQNDQQQQPQEPEEQPQIDDQPPQPPES 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00280 431 CDD CIPK_C 284 398 - -
Aip01g00280 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aip01g00280 431 Pfam NAF domain 281 338 IPR004041 GO:0007165
Aip01g00280 431 SUPERFAMILY Protein kinase-like (PK-like) 8 237 IPR011009 -
Aip01g00280 431 MobiDBLite consensus disorder prediction 405 431 - -
Aip01g00280 431 ProSiteProfiles Protein kinase domain profile. 12 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00280 431 Pfam Protein kinase domain 12 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00280 431 PANTHER - 2 207 - -
Aip01g00280 431 PANTHER - 208 417 - -
Aip01g00280 431 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Aip01g00280 431 Gene3D Transferase(Phosphotransferase) domain 1 99 275 - -
Aip01g00280 431 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 207 - -
Aip01g00280 431 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 208 417 - -
Aip01g00280 431 SMART serkin_6 12 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00280 431 ProSiteProfiles NAF domain profile. 278 302 IPR018451 GO:0007165
Aip01g00280 431 MobiDBLite consensus disorder prediction 241 263 - -
Aip01g00280 431 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Aip01g00280 431 Gene3D Kinase associated domain 1, KA1 279 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00280 Aip-Chr1 2987464 2988849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00280 1 410 CBL-interacting serine-threonine protein kinases AT5G58380 62.801 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip01g00280 Pkinase 4.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00280 - - cpap:110823886 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00280 01 2987464 2988849 Aip01g00280 01 2987464 2988849 ECH
Aip01g00280 01 2987464 2988849 Aip07g01272 07 20310105 20312676 ECH
Aip01g00280 01 2987464 2988849 Aip10g01385 10 23450092 23451423 ECH
Aip07g01272 07 20310105 20312676 Aip01g00280 01 2987464 2988849 ECH
Aip04g02406 04 109250925 109252516 Aip01g00280 01 2987464 2988849 ECH
Aip01g00280 01 2987464 2988849 Aip07g01272 07 20310105 20312676 PCT