Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00279 ATGGCACCTCTCATTGTGGATATGAAAGATGTTGTATTTATCAAACCATCTAAGTCTACACCTTCTTCTATTCTCTCTCTATCTACACTTGATCAGAGACCTGACCTTAATATGTTATGGCATATCATTCAAGTTTACAAATCACAAAAACATGATGGTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATAAAAAAATCACTCTCAATGGCCTTGTTCTATTACTACCCTCTTGCTGGGAAGATAGTCAAACATGATGATGGGAAGTTTAGAGTTCATTGCAATTCCAATGATAGAGTTCCATTTATAGAAGCAATTGCTAATTGCAATCTTTCATCTCTTCATTACCTTGATGGTATTGATGACATGGAAGTTGCAAAACAATTGGCCTTTGAGCTTCCTTCACAAGATGATGAAAGTGGACATCATTACCCTTTAGGGTTCAAGGTAACCAAATTTCTATGTGGAGGATTCACAATTGGAATTGGGGTCTCACATGTTGTATGTGACGGATTTGGAGTCTCTCAATTTCTTCATGCCATAATTGAGTTAGCAAGAGGAAGAAATGAGCCATCAATAAAGCCTGTTTGGGAAAGGGAGAGGCTGATGGGGTCAATTACCGAAATGCCCTTGCCGAGTCCTATCGATGATGCCTCGGCCGCCGTTTCACCATATCTTCCGACCACAACACTCGTACATGAATGCTTTAAGGTGGATGGAGAGAGTTTTAGAAGACTCAAAATGAGATTGATCAAAGAATTTACTAATCACAATAATATTAAGACTATGAAAGAAATTTTCACAAATTTTGAGTCACTCACTGCTTATATTTGGAGGTCAAGGGCTAGAGCCTTGAAACTAAACTATGATGGGAAAACTATGCTAGGCATATTAGTTGGGGCGAGAAGACATTTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTTTCAGTTAAAGAACTCATGGAGAAACCTCTCTCACAAGTTGTGAAGCACATCAAAGAGATCAAGAAAGTTGCTTTTACTAGAAACTATATCACGGATTCAATCAACACTTTGGTGACAAAAGAACAAGATTTTAATGTGGATGGCTCTATAGTTACATGA 1143 0.3823 MAPLIVDMKDVVFIKPSKSTPSSILSLSTLDQRPDLNMLWHIIQVYKSQKHDGYPNDQIDPNPINVIKKSLSMALFYYYPLAGKIVKHDDGKFRVHCNSNDRVPFIEAIANCNLSSLHYLDGIDDMEVAKQLAFELPSQDDESGHHYPLGFKVTKFLCGGFTIGIGVSHVVCDGFGVSQFLHAIIELARGRNEPSIKPVWERERLMGSITEMPLPSPIDDASAAVSPYLPTTTLVHECFKVDGESFRRLKMRLIKEFTNHNNIKTMKEIFTNFESLTAYIWRSRARALKLNYDGKTMLGILVGARRHLDPPLPEGYYGNAIVDANVVLSVKELMEKPLSQVVKHIKEIKKVAFTRNYITDSINTLVTKEQDFNVDGSIVT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00279 380 Pfam Transferase family 6 366 - -
Aip01g00279 380 Gene3D - 229 377 IPR023213 -
Aip01g00279 380 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 374 - -
Aip01g00279 380 PANTHER ACYL TRANSFERASE 4 2 374 - -
Aip01g00279 380 Gene3D - 3 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00279 Aip-Chr1 2982718 2986097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00279 6 365 Monolignol Biosynthesis Gene Families AT5G48930 27.540 6.01e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00279 K20240 - gmx:100801843 412.535