Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00274 ATGATACCAAATGGTTGGTTCTACAAACTGAGGGATATGAGCAAATCAAGGAAGAGAAACAATGCCTCTCATGTTATCAAGAACAAGAAAGTAACAACTTCAACTTCTCATCACTATTTCTCCATTGAACCAAGCAATAACAAAGCTGGTAAGTTTCATAACTCTCCTATTTACACTAAACATTCCGATTTTGTATTCGGCGATTCGCCAAGAAAGTCCTCCTCAAAGAGAAAAACTAAAAGGAAAACAATCTATGAGCCTTCTTCGCCGCCGATTGTTTCGTCGCCGGTGTTAGAATCTTGGAGCTTTCATTCTCTAGAAAAGAATAGTCCAAATTGGACTAAACCAAAACATAAAACAAGAGGATGTGATTCTTCGTCCGAGTCTGACTGCCACGAGTTTAATGCTCGTGGCAGCAGGCCTAATAGATTGGTAACCTCTGAATGTAGCTGCAGAGTCAGTTCTTCAACCAATGACATCATAATTGACATGAAGAGTGGATCAACCGACGCAATTTCGCAGTTAGGCCTTGCTCCAATCTTGACAAAGCCGGCGAAATTCGAAGAACAAATCTTCATAAGTCCAACTCAAACATGTCTAGTATCTCGAAAATCCTCTGCTAATTCTAAAGGAATAAAGCTAAGAGTGAATTCTCCAAAACTCGCGAACCGGAAGGTTCAAGCCTATGCAAGAAGGAGTGTGTCCTGCAGAGGATCAAACTCAAAGAATGCAGGTTTTCCGGAGGGGTTTGCCATCGTTAAGTCGTCAGTCGATCCGCAGAAAGACTTCAGGGATTCAATGGTGGAGATGATTAGAGAGAATCAAATCCTTGCTTCCAAGGATTTGGAGAACCTTCTTGCCTGCTATCTTTCACTGAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATATGGTATGACTTGGCTCAACTTAAATTATAA 954 0.4067 MIPNGWFYKLRDMSKSRKRNNASHVIKNKKVTTSTSHHYFSIEPSNNKAGKFHNSPIYTKHSDFVFGDSPRKSSSKRKTKRKTIYEPSSPPIVSSPVLESWSFHSLEKNSPNWTKPKHKTRGCDSSSESDCHEFNARGSRPNRLVTSECSCRVSSSTNDIIIDMKSGSTDAISQLGLAPILTKPAKFEEQIFISPTQTCLVSRKSSANSKGIKLRVNSPKLANRKVQAYARRSVSCRGSNSKNAGFPEGFAIVKSSVDPQKDFRDSMVEMIRENQILASKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDLAQLKL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00274 317 ProSiteProfiles OVATE domain profile. 252 311 IPR006458 -
Aip01g00274 317 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 251 313 IPR006458 -
Aip01g00274 317 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 2 315 - -
Aip01g00274 317 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 315 IPR038933 GO:0045892
Aip01g00274 317 Pfam DNA-binding domain 1 32 IPR025830 GO:0003677
Aip01g00274 317 MobiDBLite consensus disorder prediction 63 89 - -
Aip01g00274 317 MobiDBLite consensus disorder prediction 112 137 - -
Aip01g00274 317 Pfam Transcriptional repressor, ovate 256 312 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00274 Aip-Chr1 2934786 2935739 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip01g00274 Ovate 2.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00274 - - adu:107474777 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00274 01 2934786 2935739 Aip01g00274 01 2934786 2935739 ECH
Aip01g00274 01 2934786 2935739 Aip07g01256 07 19837499 19838874 PCT