Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00249 ATGAGGAGGCTACTCTTCAATAAGAGGTACTTTGGTAATGGTAGAGAAGATGGAGGAGCAGGTGCTGAGGAAGTGGAGTATGTTGAATCACTCTTCATTGCTATAAGGCACATTTATGCATTTTCTGTTTCCGATTATCTTCCATGGTTGTGGTGGCTTGATTTTGAAGGTCATAAAAAAATATTGAAGGAAGCAACTAATACCATAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTCATCAGTGGAGGAATGGGACAAGGGCACATCAAGAGGATTGGCTTGATGTTCTTATATCTTTGAAAGATGCTAACAGCAATCCATTTTTGACTCTCCAGGAAATCAAAAGTCAAATCATGGAAATTGCAGTTGGAGCAATAGATAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATGATAAATCAACCAGAGATGCTTCAAAAGGCTACTCAAGAATTGGACAGTGTGGTAGGAAAAGAGAGGTTAGTGCAAGAATCAGATATTCCAAAACTCAACTATGTGAAGGCATGTTTAAGAGAAGGTTTTCGCCTTCACCCAATTGCAGACTTCAATGTTCCTCATGTCTCAATGGAAGATACAATTGTTGCTAATTACTTTATCCCAAAGGGTAGTCATATTCTTATTAGGAGGCAAGGTATTGGCCAAAATCCAAGAGTTTGGGAAGAACCATTGAAATTTAAACCTGAAAGACATTTGAAGAACGATGCATGTCGTGTGACTTTGGCTGAACCAAATTTGGAGTTGTTCACATTCGGCATTGGAAGACGAAGCTGCCCTGCAATCACACTTGGGTCTACAATGACTATTATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGATTGCACCTCTCAATGAACCAACCATTGATCTCTCTGAATATGAAAGGGACACCACAAAAGCTAAGCCACTAGTTGCACTGGGAAAGCCAAGATTACCCGTGAAAGTTTATCATCAGATAATGAATTGA 1002 0.3922 MRRLLFNKRYFGNGREDGGAGAEEVEYVESLFIAIRHIYAFSVSDYLPWLWWLDFEGHKKILKEATNTIRKYHDPIIEERIHQWRNGTRAHQEDWLDVLISLKDANSNPFLTLQEIKSQIMEIAVGAIDNPYNNVEWVLSEMINQPEMLQKATQELDSVVGKERLVQESDIPKLNYVKACLREGFRLHPIADFNVPHVSMEDTIVANYFIPKGSHILIRRQGIGQNPRVWEEPLKFKPERHLKNDACRVTLAEPNLELFTFGIGRRSCPAITLGSTMTIMLFARLVHGFTWIAPLNEPTIDLSEYERDTTKAKPLVALGKPRLPVKVYHQIMN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00249 333 Pfam Cytochrome P450 38 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 Gene3D Cytochrome P450 2 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 328 - -
Aip01g00249 333 SUPERFAMILY Cytochrome P450 18 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS E-class P450 group I signature 219 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS E-class P450 group I signature 268 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS E-class P450 group I signature 258 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS E-class P450 group I signature 135 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS P450 superfamily signature 179 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS P450 superfamily signature 144 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PRINTS P450 superfamily signature 259 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00249 333 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00249 Aip-Chr1 2605259 2607705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00249 2 328 Cytochrome P450 AT5G05260 52.744 6.64e-132 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00249 - K12153 pvu:PHAVU_006G0788000 430.639