Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00246 ATGGAATTTGGTCCTACCTTGTTGCTCATGCTATTTTGCATTATTATACCTCTCTTCAACAAACTCCTTAAACTCAATGACTCAACAAAGAAATCAAAGAAGCCTAGGCTCCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAACATCCCTCAAATGCTTGCAAACAAACCCACTCTTAGATGGATACAAAACATCATGAATGATCTCAACACCGAAATCGCATGCATCCGTCTAGGCAATGTCCATGTTATCCCAGTGACAAGTCCTTCCATTGCACGCCAAATTTTAATGAAACAAGATGCAATCTTCGCATCAAGACCATTGAGTTGGTCAAGTAAATTTGTCTCATCGGGATACCTAGCCACAACTCTAACACCCTTTGGAGAACAATGGAAGAAAATGAAGAGAGTCATAGTTGAGGAATTGATTTCGCCACAAAGGCATCAATGGCTGCATGACAAAAGGGTGCAAGAAGCCGATAACCTTGTTCTCTATGTGTATAACCAAATCAAGAATGGTAGTGGCCTAGTGGATTTGAGGCATGTAGGGCAACACTATGGTGGAAACTTGATTAGAAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGAGAAGATGGGGGTCCTGGTGCTGAGGAATTGGAGTATGTTGAAGCACAGTTCATGGTGGTAAGGCATATTTATGCATTTTCTGTTTCTGATTATCTTCCGTTCTTGTGGGGGTTTGATTTTGAAGGTCATAAGAAAATATTGAAGAAAGCTACTAATACCCTAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTTGTCAATGGAGGAATGGGACCAGGACACATCAAGAGGATTGGCTTGATGTTCTTATCTCATTGAAAGATGCTAACAACAATCCATTTTTGACTCTCCAGGAAATCAAAAGTCAAATCATGGAAATTGCAGTTGGAACAATGGACAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATAATTAATCAACCAGAGATACTTCAAAAGGCTATTGAAGAATTAGATAAAGTGGTAGGAAAGAAGAGGTTAGTACAAGAATCAGATATTCCAAAGCTCAACTATGTGAAGGCATGTTTGAGAGAAGGTTTTCGTCTTCACCCAATTAATGACTTTAATATTCCTCATGTTTCAATGAAAGACACAATTGTTGCCAATTACTTCATCCCAAAGGGTAGCCATATTCTTATTAGGAGGCAAGGTATTGGCCAAAATCCAAGAGTTTGGAATGAACCATTGAAGTTCAAACCTGAAAGACATTTGAAGAAAGATGGATATGATTTGACTTTGACTGAGTCAAATCTAGAGTTGTTCATATTCGGCACTGGAAGACGAAGTTGTCCTGCAATCACACTTGGGACTACAGTGATTGTTATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGATTGCACCTCCCAATGAACCAAGCATTAATCTTTCTGAACTTGAAAAGGATACCACAAAAGTTAAGCCACTAGTTGCACTGGGAAAACCAAGACTACCACTGGAAGTTTATCATCAAATCAATTAA 1572 0.3912 MEFGPTLLLMLFCIIIPLFNKLLKLNDSTKKSKKPRLPPGPKPWPIVGNIPQMLANKPTLRWIQNIMNDLNTEIACIRLGNVHVIPVTSPSIARQILMKQDAIFASRPLSWSSKFVSSGYLATTLTPFGEQWKKMKRVIVEELISPQRHQWLHDKRVQEADNLVLYVYNQIKNGSGLVDLRHVGQHYGGNLIRRLLFNKRYFGNGREDGGPGAEELEYVEAQFMVVRHIYAFSVSDYLPFLWGFDFEGHKKILKKATNTLRKYHDPIIEERICQWRNGTRTHQEDWLDVLISLKDANNNPFLTLQEIKSQIMEIAVGTMDNPYNNVEWVLSEIINQPEILQKAIEELDKVVGKKRLVQESDIPKLNYVKACLREGFRLHPINDFNIPHVSMKDTIVANYFIPKGSHILIRRQGIGQNPRVWNEPLKFKPERHLKKDGYDLTLTESNLELFIFGTGRRSCPAITLGTTVIVMLFARLVHGFTWIAPPNEPSINLSELEKDTTKVKPLVALGKPRLPLEVYHQIN 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00246 523 SUPERFAMILY Cytochrome P450 38 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 519 - -
Aip01g00246 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Aip01g00246 523 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00246 523 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 8 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00246 Aip-Chr1 2572047 2574997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00246 6 519 Cytochrome P450 AT4G39950 53.204 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00246 - K14984 gmx:100809902 667.537