Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00230 ATGCACACAAGCTGTTTGATATGTTGTTTCAACTGTTATAGTGAGAAACCTGCTTCTAGAAGTTCTCATGAGTTCTTCCTCTGTTGCCATTTTGGTTCCTTTAAGGAAGCTATGAAGTTTGGAAACGTTTACTCTGAATTCAGTTGTCCAGACAGCAAGCAACTCTCCATGAACTTCATTTGTAGATCAGTGACTCCTTTCTTGTTCATCATAGTTTTTCTTTTTCCTCTGACTACTATTGCTGCTGATCTGAGCTCAGACAAGCAAGCTCTTCTTGATTTCGCCAATGCCATTCCTCACCGTCGAAATCTTCAGTGGAATCCTGCATCCTCAGTTTGTACATCTTGGGTAGGCATAACTTGCAATCAAAATAGAACTCGTGTTATTTATGTCCGGCTCCCCGGAGTTGGACTAGTTGGCGCAATTCCGACCAACACACTTGGCAAGCTTGATGCTGTAAAAATCATTAGCCTTCGGTCCAACCTACTTGGTGGAAATCTGCCTGCTGACATTGCTTCTCTTCCGTCTCTCGAGTATCTTTATCTGCAGCATAACAACCTTTCCGGTGACATACCTTCCTCATTGTCACCTAAACTCAATGTACTCGATTTATCATATAATGCCTTCACCGGAAGCATTCCAAAGACACTGCAAAATTTGACACAATTAACTAGTTTGAATCTCCAGAACAACTCATTATCTGGAGAGATACCTAATCTAAATGCTACCAGTCTCAGGAACTTGAATTTAAGCTACAACCATTTGAATGGTTCTATCCCTTCAGCTCTTGGGATTTTTCCCAACTCCTCTTTTGAAGGAAACATTCTCTTATGTGGACCACCTTTGAAGCCATGCTCTGGGGTTCCACCGGCAGCTCCACCAGCTGTGACACCGGCTCCACAGCCATCTATTGGAAGCTCAAAGAATAAACTGAGTAAAGTAGCTATCATTGCAATTGCGGTTGGAGGAGGCGTGCTGCTTTCTCTTGTAGCTCTTGTTATTGTCCTTTGCTGTGTAAAGAAGAAAGATGAGGAAGAAGCTCCTGGTGCAGTTAAAGGGAAGGGTTCTATTGGAGGTAGGAGTGAGAAGCCGAAAGAACAGTTTGGTAGTGGAGTGCAAGAACCTGAGAAGAACAAGCTGGTTTTCTTCGAGGGAAGCTCTTACAATTTTGATCTTGAGGATTTGCTAAGAGCTTCGGCCGAAGTTTTGGGAAAGGGTAGCTATGGAACTGCATACAAGGCTATACTAGAGGAGTCGACCACAGTTGTGGTGAAAAGGTTGAAGGAAGTTGTGGTTGGTAAGAAGGACTTTGAGCAGCAGATGGAGATCATTGGAAGGGTTGGACAACACCAAAATGTGGTGCCTCTTCGCGCTTATTATTATTCGAAAGACGAGAAGCTTCTGGTTTATGATTATGTCCCTAGTGGCAACTTATCCTCCCTCTTGCACGGCAACAGGGCAGGTGGAAGAACTCCATTAGATTGGGACACACGTCTTAAAATCGCTCTCGGAACAGCCAGAGGACTAGCTCACCTTCATTCTGTTGGCGGTCCGAAATTTGCACATGGAAACATTAAGTCCTCAAATGTCCTAATCAACCATGATAAAGACGGCTGCATATCTGATTTCGGCCTAGCCCCTCTTATGAATGTGCCTGTAACACCTTCTAGAGCTGTAGGTTACCGTGCACCCGAGGTAGTTGAGACCCGAAAGCACTCTCATAAATCAGATGTGTACAGCTTTGGTGTCCTACTGCTAGAGATGCTTACCGGGAAAGCGCCACTTCAGTCTCCCGGACGCGAGGACATGGTTGATCTGCCTAGGTGGGTCCAATCTGTTGTTAGGGAAGAATGGACTGCCGAGGTTTTCGACGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGCTGCAAATAGCCATGACCTGTGTAGCAAAGATGCCGGATATGCGGCCGAACATGGATGAAGTGATGAAAATGATAGAAGAGGTCCGGCAATCTGACTCGGAAAACCGGCCGTCTTCTGAAGAGTATAAGTCCAAGGACTCAAATGTTCAAACTCCATAA 2079 0.4483 MHTSCLICCFNCYSEKPASRSSHEFFLCCHFGSFKEAMKFGNVYSEFSCPDSKQLSMNFICRSVTPFLFIIVFLFPLTTIAADLSSDKQALLDFANAIPHRRNLQWNPASSVCTSWVGITCNQNRTRVIYVRLPGVGLVGAIPTNTLGKLDAVKIISLRSNLLGGNLPADIASLPSLEYLYLQHNNLSGDIPSSLSPKLNVLDLSYNAFTGSIPKTLQNLTQLTSLNLQNNSLSGEIPNLNATSLRNLNLSYNHLNGSIPSALGIFPNSSFEGNILLCGPPLKPCSGVPPAAPPAVTPAPQPSIGSSKNKLSKVAIIAIAVGGGVLLSLVALVIVLCCVKKKDEEEAPGAVKGKGSIGGRSEKPKEQFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKKDFEQQMEIIGRVGQHQNVVPLRAYYYSKDEKLLVYDYVPSGNLSSLLHGNRAGGRTPLDWDTRLKIALGTARGLAHLHSVGGPKFAHGNIKSSNVLINHDKDGCISDFGLAPLMNVPVTPSRAVGYRAPEVVETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGREDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKMPDMRPNMDEVMKMIEEVRQSDSENRPSSEEYKSKDSNVQTP 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00230 692 Pfam Protein kinase domain 400 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00230 692 Pfam Leucine rich repeat 197 233 IPR001611 GO:0005515
Aip01g00230 692 ProSiteProfiles Protein kinase domain profile. 397 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00230 692 MobiDBLite consensus disorder prediction 666 683 - -
Aip01g00230 692 MobiDBLite consensus disorder prediction 349 372 - -
Aip01g00230 692 Gene3D Ribonuclease Inhibitor 84 240 IPR032675 -
Aip01g00230 692 SUPERFAMILY L domain-like 89 285 - -
Aip01g00230 692 PANTHER LRR RECEPTOR-LIKE KINASE 45 692 - -
Aip01g00230 692 MobiDBLite consensus disorder prediction 666 692 - -
Aip01g00230 692 Pfam Leucine rich repeat N-terminal domain 85 122 IPR013210 -
Aip01g00230 692 PANTHER OS05G0588300 PROTEIN 45 692 - -
Aip01g00230 692 Pfam Leucine Rich Repeat 176 196 IPR001611 GO:0005515
Aip01g00230 692 SUPERFAMILY Protein kinase-like (PK-like) 401 675 IPR011009 -
Aip01g00230 692 Gene3D Ribonuclease Inhibitor 241 286 IPR032675 -
Aip01g00230 692 ProSitePatterns Protein kinases ATP-binding region signature. 403 434 IPR017441 GO:0005524
Aip01g00230 692 Gene3D Phosphorylase Kinase; domain 1 365 472 - -
Aip01g00230 692 Gene3D Transferase(Phosphotransferase) domain 1 473 690 - -
Aip01g00230 692 ProSiteProfiles Leucine-rich repeat profile. 222 244 IPR001611 GO:0005515
Aip01g00230 692 ProSiteProfiles Leucine-rich repeat profile. 176 198 IPR001611 GO:0005515
Aip01g00230 692 CDD STKc_IRAK 403 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00230 Aip-Chr1 2332154 2335834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00230 70 690 Receptor kinase-like Gene Family AT5G58300 67.666 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip01g00230 Pkinase 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00230 - - gmx:100796171 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00230 01 2332154 2335834 Aip01g00230 01 2332154 2335834 ECH
Aip01g00230 01 2332154 2335834 Aip07g01230 07 19005687 19010038 PCT