Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00227 ATGTATCTTTCAAAGGGTTGCAAGCATCAAGTTCTTTTCATCTTGTGGTTCTGCTGCTACTTGCTACATGTTTCGGCGGAGAATAATATCACTGACCCTGTTGAAGTTGAAGCATTGAATGCCATAAAGCAAAGATTGAATGACCCTAATGGAAATTTGAGCAACTGGGGAGATAATGATCCATGTACATCGAAGTGGACAGGAGTTTTGTGCTACAATGAAACATTGGATGATGGATATCTACATGTTCAAGAACTGCAATTACTGAGTTTGAACCTGACAGGAAATTTGGCACCCGAGCTCGGCAACTTAACCCGTTTGTTAAGATTGAACTTTATGTGGAACAAGATAACTGGGAGTATTCCGAAGGAAATCGGTGAAATCAAAACTTTGCAACTCTTGCTTCTGAATGGAAACAACTTAACTGGTCCACTACCAGATGAGCTCGGCTATCTTCCGAATTTGGATAGGATACAAATTGATCAGAACAATATATCAGGGCCTGTACCTAAATCATTTGCAAACCTGAACAAGACAAAGCACTTCCACATGAACAATAATTCACTTAGCGGACAGATCCCACCGGAGCTTTTCCGGTTGCCGAGTCTTGTTCATCTTCTTCTTGATAACAACAAATTAACAGGATATCTTCCGAGTGACCTCTACAAGTTGCCAAACTTACTTATAATTCAACTTGATAACAATAACTTTGAGGGAAATACTATTCCAAGTTCTTATGGCAACATGTCAAAACTGCTGAAAATGAGTCTTAGGAATTGCAACTTGAGAGGACCAGTTCCTGATTTAAGCAGGATACCCCGCCTTCTTTATCTAGACCTCAGTTCCAATCAGTTGAATGGATCAATTCCTAGCAACAAGCTTTCCAACAACATCACAACCATTGATTTATCGAACAACAAGCTTACTGGAACTATTCCATCCTACTTTTCTAGTCTTCCTGTTCTTCAAAGATTGTCACTTGAAAACAATTTATTGAAAGGCAGTGTTTCTTCCACCATTTGGCAGAACAAGACTTTGAATGGCAAAAAATTTATCTTGGAGTTGCAAAACAATAGCCTTACAAGCATATCAGGCACTACTGATATTCCTCCAAATGTCACACTCTCGCTCAATGGGAATCCTCTATGCTCAAATAATAAGTCCTTGGTTCAATTCTGTGGATCTGAGACTGCTGACAATAACACAAATGGCATTGTTTCAACAAATTCCAGCTCATGCCCTGCTCAAGCGTGCCCTCCTCCTTTCGAATATTCCTTGGACTGTTTCTGTGCAGCACCATTGCTTGTCGGTTATCGGCTGAAAAGTCCTGGATTTTCGGATTTTCGACCATATGTGTTTTCCTTTCAGGAATACCTGAGTACAGGTCTTAGTATACAGATGGATCAGCTTCAATTTAATTTTTATTGGCAAGCCGGACCTCGGTTGAGAATGGACTTGAAGCTTTTTCCAGTTTATGTTGATAACAGCAGCTCTCATATTTTCAATACAACCGAGCTCCTACGGCTCATGACCATGTTCACCGGATGGCACATTCAAGACAGTGATTTGTTTGGTCCTTATGAGTTACTTGGCTTCAATCTCCTTGATCCTTACAAGGTGGTCATCCCCAAGTCTTCAAATTCAAAGATAAGTACAGGTGCTTTGGCTGGCATAATCTTAGGATCAATTGCCTGCGCCGTGACGTTATCTGCAATAGTTACACTCCTTATATTAAGAGTGAAGTTGAAAGATCGTCCTGTAGTTTCGAAGCGTCGTCATTCATCTAAGATCTCAATAAAAATTGATGGTGTAAGGGCCTTCACTTTTGGAGAATTATCTGCTGCTACCAACAATTTTAGCAACTCTTCTCAAGTAGGACAAGGAGGTTATGGCAAGGTTTACAAAGGTATTCTTTCTGATGGCACCGTTGTTGCCATTAAACGTGCGCAGGAGGGGTCACTGCAAGGTGAGAAAGAGTTCCTCACAGAAATATCATTACTTTCGAGGCTACATCATCGCAACCTTGTGTCTCTCCTTGGATACTGTGATGAAGAGGGTGAACAGATGCTGGTTTATGAATTCATGCCGAATGGTACACTAAGGGAACACATTTCAGTTACAGCAAAAGATCCTCTGAGTTTCGCCATGAGATTGAAGATTGCGCTAGGATCAGCAAAGGGTCTTATGTATTTACACACTGAAGCTGATCCTCCAATATTCCACAGAGATGTTAAAGCCAGCAACATATTATTGGACTCTAAGTTCACAGCAAAAGTGGCTGATTTCGGACTTTCGCGGCTCGCTCCAGTTCCTGATCTTGAAGGAGTTGTCCCTGGCCATGTATCCACAGTGGTAAAGGGCACCCCGGGTTATCTTGATCCAGAGTACTTCCTAACTCACAAGTTGACTGATAAAAGCGATGTTTATAGTCTTGGGGTTGTGTTTCTGGAACTTTTGACTGGGATGCAACCAATCTCACATGGCAAGAACATTGTTAGAGAGGTTAATGTCGCGTATCAATCTGGCGTAATATTTTCGATCATTGATGACCGCATGGGGTCCTATCCATCTGAGCATGTAGAGAAATTCTTGACCTTGGCCCTGAAGTGTTGCGAAGACGAGCCAGAAGCCCGGCCTAAAATGGCAGAGGTGGTTAGGGAGCTTGAGAACATATGGTCCATGATGCCAGAATCAGATACCCGGAAAGCCGAATCGATAACCAGTGATTCAGGAAAGTTAAGTACAAGTACACCATCTTCATCCTCTGCTATAAAGACTCCTTTTGTATCAGGAGATGTTTCAGGTAGTGACCTTGTTAGTGGAGTAATACCAAGCATCAAGCCAAGATAG 2850 0.4179 MYLSKGCKHQVLFILWFCCYLLHVSAENNITDPVEVEALNAIKQRLNDPNGNLSNWGDNDPCTSKWTGVLCYNETLDDGYLHVQELQLLSLNLTGNLAPELGNLTRLLRLNFMWNKITGSIPKEIGEIKTLQLLLLNGNNLTGPLPDELGYLPNLDRIQIDQNNISGPVPKSFANLNKTKHFHMNNNSLSGQIPPELFRLPSLVHLLLDNNKLTGYLPSDLYKLPNLLIIQLDNNNFEGNTIPSSYGNMSKLLKMSLRNCNLRGPVPDLSRIPRLLYLDLSSNQLNGSIPSNKLSNNITTIDLSNNKLTGTIPSYFSSLPVLQRLSLENNLLKGSVSSTIWQNKTLNGKKFILELQNNSLTSISGTTDIPPNVTLSLNGNPLCSNNKSLVQFCGSETADNNTNGIVSTNSSSCPAQACPPPFEYSLDCFCAAPLLVGYRLKSPGFSDFRPYVFSFQEYLSTGLSIQMDQLQFNFYWQAGPRLRMDLKLFPVYVDNSSSHIFNTTELLRLMTMFTGWHIQDSDLFGPYELLGFNLLDPYKVVIPKSSNSKISTGALAGIILGSIACAVTLSAIVTLLILRVKLKDRPVVSKRRHSSKISIKIDGVRAFTFGELSAATNNFSNSSQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLLGYCDEEGEQMLVYEFMPNGTLREHISVTAKDPLSFAMRLKIALGSAKGLMYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDLEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGVIFSIIDDRMGSYPSEHVEKFLTLALKCCEDEPEARPKMAEVVRELENIWSMMPESDTRKAESITSDSGKLSTSTPSSSSAIKTPFVSGDVSGSDLVSGVIPSIKPR 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00227 949 Gene3D Ribonuclease Inhibitor 187 295 IPR032675 -
Aip01g00227 949 SUPERFAMILY Protein kinase-like (PK-like) 604 911 IPR011009 -
Aip01g00227 949 MobiDBLite consensus disorder prediction 898 949 - -
Aip01g00227 949 CDD STKc_IRAK 625 891 - -
Aip01g00227 949 Gene3D Phosphorylase Kinase; domain 1 583 694 - -
Aip01g00227 949 SMART serkin_6 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00227 949 ProSiteProfiles Protein kinase domain profile. 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00227 949 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Aip01g00227 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Aip01g00227 949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 921 - -
Aip01g00227 949 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Aip01g00227 949 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Aip01g00227 949 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 921 - -
Aip01g00227 949 SUPERFAMILY L domain-like 41 393 - -
Aip01g00227 949 Pfam Protein kinase domain 620 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00227 949 Gene3D Ribonuclease Inhibitor 296 387 IPR032675 -
Aip01g00227 949 Gene3D Transferase(Phosphotransferase) domain 1 695 912 - -
Aip01g00227 949 MobiDBLite consensus disorder prediction 907 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00227 Aip-Chr1 2280124 2285693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00227 18 901 Receptor kinase-like Gene Family AT5G01950 58.751 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip01g00227 Pkinase 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00227 - - gmx:100799888 1476.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00227 01 2280124 2285693 Aip01g00227 01 2280124 2285693 ECH