Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00197 ATGGGAATCCATATTATGAAGATTTTGATCAAACACAAACACTCATTTGGTTTCTCAATCTCCATTCGATCGAAAACTACGTCGGCTAAGTATGTCGCCTCGAGAGTTCGAGACCCTACATTTGAGAAGCTCATGGACAAGTACAAGAGCCTCTTCAAAGTCATTGCCATTCAAGATCTCATCCTCACAAATCCCAGGAATCCGTCCGTGTCCATTGACTTTCTCTCCAGGCTCTCCCAGAAACTCCATCTCAACCGCGGTGCCACTTCCTTCCTCCGCAAGTTTCCTCACATCTTCCAAATTTATTATGACCCCTCCAAATTGCTGCCTTTTTGCAGGCTCACAGATGCTGCTCTTGATGTTTCCAAGCAGGAAGAGAATGCCATTAATGCTTCTTTGCCAATGGTGGCTGATCGATTGGTCCGGATATTGTCCATGTCTGCGTCCAAAACAGTTCCCCTTCGAGCAATTTTCAAGGTCTGGAGGGAGCTTGGGCTGCCTGATAATTTCGAGGACTCAGTTATATCTGCAAATCCTAGTGTTTTCCAGCTGTGTGATGCCCATGAACCTAACACTCATTTGTTGAAGCTGGTTGAAGGTGTTCGTCGAAATGGTTTTAGAGCAGCCATTGAAGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGATTGCAATGTCAGGACAGAATTGCAGTTCAGTTTTAAGCATGGGTATCCTCCAGGGATGAAACTTGGCAAGAACTTCAAGGCCAAGGTGAAAGAATGGCAGAGTTCACCGTACGTTGGGCCCTATGAGGTGGTTGTTGGGGAGAAAAAGAAGTCTAAGGCAGCATTGATGGCCATGGAGAAACGAGCAGTGTCGATTGTTCACGAGTTCCTGAGTTTAACCGTGGAGAAGATGGTAGAAGTTGAAAAGATCAGCCAATTCAGAAAATGGTTTGGGATTGACTTCAACATAAGAGACCTGTTCTTGGATCATCCAGGGATCTTCTATCTATCAACAAAGGGGAAACGCCACACTGTTTTCTTGAGGGAAGCATATGAACGAGGTTGTTTGATTGAACCAAATCCTGTATATGATGCAAGGAGAAGGCTTCTTGATCTTGTTGCTATGGGACGTCGTTGTCGTTCTGCTATTAATTCAAATTTGCAGGATGGAAGCAGCAGCAGCGACAATGATGGCATTGAAGCAGAAGAAACCCAACAAAGGCATGGCTCATTATCTTCTTGA 1227 0.4507 MGIHIMKILIKHKHSFGFSISIRSKTTSAKYVASRVRDPTFEKLMDKYKSLFKVIAIQDLILTNPRNPSVSIDFLSRLSQKLHLNRGATSFLRKFPHIFQIYYDPSKLLPFCRLTDAALDVSKQEENAINASLPMVADRLVRILSMSASKTVPLRAIFKVWRELGLPDNFEDSVISANPSVFQLCDAHEPNTHLLKLVEGVRRNGFRAAIEDWRVVECCKEDCNVRTELQFSFKHGYPPGMKLGKNFKAKVKEWQSSPYVGPYEVVVGEKKKSKAALMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDFNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYDARRRLLDLVAMGRRCRSAINSNLQDGSSSSDNDGIEAEETQQRHGSLSS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00197 408 Pfam Plant organelle RNA recognition domain 36 373 IPR021099 GO:0003723
Aip01g00197 408 PANTHER OS04G0618900 PROTEIN 11 399 - -
Aip01g00197 408 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 11 399 IPR045040 GO:0003723
Aip01g00197 408 MobiDBLite consensus disorder prediction 380 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00197 Aip-Chr1 1971921 1973724 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00197 - - gmx:100808404 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00197 01 1971921 1973724 Aip09g01613 09 34557446 34561035 PCT