Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00189 ATGATGTTTAATAAACCACTCAAACTCTTGGCCTTGACCTTAATCATATTATGGTCATGGTGGACTTCATTCCATTTCCATGGAGCATTAGGAGACCCCCAAACCCTTTTGCTCAACAAAGGTTGCAGCCAATACAACGCAACCAACTTGTCAAATTTCAACCAAAACCTAAACTCAACTTTGAGAGATCTTAGAAATCAAAGTAAGAGTATGGATTTTGGTACATCACACCATGCCGTAGGAGCGGATCCTGTCTACGGCATGTTTCAATGCAGGGACTACTTATCAAAGGCTGATTGTGCCACGTGTTTCTCTGTCGCGGCCGCCCAAATTCGCAATTGCTCCGCCGGAGCTAATGGTGCCCGGGTGATATATGATGGATGTTTCATCAGGTACGAAAGCAATGAATTCTTCAACCAAACAACTCTACCGGGTAACAGCATGATTTGTGGTAACAAAACTGCAAGTGGAGGATCAAATGCTTTCAATGGAGTTGCACAAAAAGTGCTACAAGATTTGCAAACAGCAACACCAAGAATTCCCGGTTACTTTGCAGCTACCAAGACACAAGTAGCCGGTGGCGGCGGCGGCGGCGCAATCTATGCCGTCGCACAATGTGCTCAATCCGTGTCTGAGGGAGGTTGTTCGGAATGCTTGAATGTTGGCGTAACCAACATTCAAAGTTGTCTTCCTAATACAGATGGTAGAGCATACGATGCTGGTTGTTTTATGAGATATTCTATGACACCATTCTTTGCTGATAACAAAGTTGTTGATGTCACACCATATTTGAAACAACAAGAAGGAGGAAATTCAAGCAACAACAAAGGGGCTATTATTGGTGGTGTTATTGGAGGTGTAGTACTTTTTATGATTCTCTTTGCATTGTTTGTGTGGCTTAGAAGAAACAAGAAATTACCAACAAGAGGTCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGCCCAGTTACTTATAGGTATAAAGATTTAAAAAGTGCAACAAAAAATTTTAGTGATGAAAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATACAAGGGTACTCTGAAAAATGGAAAAATAGTTGCTGTGAAGAAATTGGCTTTAGGGCAATCAAGAAAAATTGATGAAAGTTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCACCATAGGAATCTGGTTAGACTTCTTGGATGTTGTAGTAAGGGCCCAGAAAGAATCCTTGTTTATGAGTACATGGCAAATAGCAGCCTTGACAGATATTTATTTGGTGAGAAGAAGGGTAATCTGAATTGGAAACAAAGGTATGATATAATTGTAGGCACAGCAAGAGGTCTTGCATATCTACATGAGGATTTCCATGTTTGTATCATACACAGAGATATAAAAACTAGCAACATACTATTGGATGATGATCTTCAACCTAGAATTGCTGATTTTGGTTTAGCAAGGCTTCTACCTGAGGACAAATCTCACCTTAGCACAAAATTTGCAGGAACTTTAGGATATACAGCACCTGAATATGCAATTCATGGTCAATTATCAGAGAAAGCTGATGCTTATAGCTATGGTGTTGTGGTCCTGGAAATTATAAGTGGTCAAAAGAGTAGTGAATTGAGAGATGATGCCGACGGTGAATTTCTCCTTCAAAGGGCATGGAAACTGTATGAGAAAGACATGCACTTGGAGCTAGTGGACCCCACATTGGACCCTGAAGACTATAGTTCAGAAGAAGTAAAGAGAATCATAGAAATTGCTTTGTTGTGCACTCAAGCATCACCTTCCACAAGACCAACAATGTCCGAGGTGGTTCTCTTACTCAAGAGTAAGAACTTATTGATGGAGAATATGATGAGACCTACTATGCCTGTCTTTGTTCATTCTAGTAATGTTAGGTCTCAACATGACACATCTACTTCAACTGCTTCATCATCTGTGTCTGCATCCAAAGCTACAGTTTCCACTTCAGTACTATCTGCTCGTTGA 1995 0.404 MMFNKPLKLLALTLIILWSWWTSFHFHGALGDPQTLLLNKGCSQYNATNLSNFNQNLNSTLRDLRNQSKSMDFGTSHHAVGADPVYGMFQCRDYLSKADCATCFSVAAAQIRNCSAGANGARVIYDGCFIRYESNEFFNQTTLPGNSMICGNKTASGGSNAFNGVAQKVLQDLQTATPRIPGYFAATKTQVAGGGGGGAIYAVAQCAQSVSEGGCSECLNVGVTNIQSCLPNTDGRAYDAGCFMRYSMTPFFADNKVVDVTPYLKQQEGGNSSNNKGAIIGGVIGGVVLFMILFALFVWLRRNKKLPTRGPRGDILGATELKGPVTYRYKDLKSATKNFSDENKLGEGGFGDVYKGTLKNGKIVAVKKLALGQSRKIDESFESEVKLISNVHHRNLVRLLGCCSKGPERILVYEYMANSSLDRYLFGEKKGNLNWKQRYDIIVGTARGLAYLHEDFHVCIIHRDIKTSNILLDDDLQPRIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYAIHGQLSEKADAYSYGVVVLEIISGQKSSELRDDADGEFLLQRAWKLYEKDMHLELVDPTLDPEDYSSEEVKRIIEIALLCTQASPSTRPTMSEVVLLLKSKNLLMENMMRPTMPVFVHSSNVRSQHDTSTSTASSSVSASKATVSTSVLSAR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00189 664 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 28 650 - -
Aip01g00189 664 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Aip01g00189 664 Pfam Salt stress response/antifungal 42 134 IPR002902 -
Aip01g00189 664 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Aip01g00189 664 Gene3D Transferase(Phosphotransferase) domain 1 416 632 - -
Aip01g00189 664 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00189 664 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00189 664 Gene3D - 34 137 IPR038408 -
Aip01g00189 664 Gene3D - 146 251 IPR038408 -
Aip01g00189 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 650 - -
Aip01g00189 664 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Aip01g00189 664 Gene3D Phosphorylase Kinase; domain 1 317 415 - -
Aip01g00189 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Aip01g00189 664 SUPERFAMILY Protein kinase-like (PK-like) 323 644 IPR011009 -
Aip01g00189 664 ProSiteProfiles Gnk2-homologous domain profile. 35 137 IPR002902 -
Aip01g00189 664 CDD STKc_IRAK 345 611 - -
Aip01g00189 664 Coils Coil 47 67 - -
Aip01g00189 664 SMART serkin_6 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00189 664 Gene3D Single helix bin 266 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00189 Aip-Chr1 1912716 1920570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00189 2 664 Receptor kinase-like Gene Family AT1G70520 38.782 3.85e-136 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip01g00189 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00189 - - gmx:100813585 950.273