Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00174 ATGGTGCAATTGAACAAGCAAGAAAGGTTATGGAGATTGGTAACCGTTGTTTCAGCTGTAATTGGATTAATCTGTTATGCTCTCAGCTCCTCCTTCAACCATCTCTTCGGCAACTGGAAACCATGGAAGATCATTTTCTACGCTCTCTTCAGTTTCATCACTTTCCTCGTCGCTCTTCTTGCAAAGGATTGGAAAAAGTCAAGAATTCTTAGATTCTTAGCACGAAAGTGGCAGCGCTTGAGAATTCTTCGGTTCAGATCTGTGACTACGTTCTTGGTTATGCTATGGACCACCGTCTTCTCCTTCTTCTCCGATAGAGCCACCGCTATGGTTGCAAAGCCAGATGCATATAGTGTGGTTTCTTCAGTTGCTTTTTCCACCATGTCACTTAGCTTATCGAGGAATGTCCCCTTTGTGTTCGAAGAACTCATGTACTTCTTCATTGGAATTTTCATAGCTCAAATGATGAAGATTAAGTTGCTGTTGGGATTTTCAGTTGGAACAGTTATTAGCTTTTGCTTTGTGATTCTCCATTCTCATGTAGATGCTCATGATCCAATAGAACGTGTTGGGATCCAAGATCCGCATCCTCAAGTGGCCATTGATGTAGAAAACCACGCAATCACTAACACTGCTGCTGCTCCTTCAACGGTTCAACAACGACCGGTGGCGACCGATGAGGATGAAGCTTCTCCATTCGACATCACGGCCACCAAAAATGCCTCGATTGATCGGCTCAAGCAGTGGAGGCAAGCGGCACTTGCGCTAAATGCTTCTCGCAGATTTGCTTACACCTTGGACTTGAAGAAAGAAGAGGAAAGGAAGCAAGTAATGAGAAAGATTCGAAATCATGCAGAAGCAATTAGGAATGCGCATCGTTTCAGAGCAGCCAGTGAAGCTGTACAACCCCTTCTGAACTCATCCGATGATGACGATGACGAAGAGGAGGAGGAGGAGGAAGATGAAGAAGAGAAGCTTCAGTGA 984 0.4461 MVQLNKQERLWRLVTVVSAVIGLICYALSSSFNHLFGNWKPWKIIFYALFSFITFLVALLAKDWKKSRILRFLARKWQRLRILRFRSVTTFLVMLWTTVFSFFSDRATAMVAKPDAYSVVSSVAFSTMSLSLSRNVPFVFEELMYFFIGIFIAQMMKIKLLLGFSVGTVISFCFVILHSHVDAHDPIERVGIQDPHPQVAIDVENHAITNTAAAPSTVQQRPVATDEDEASPFDITATKNASIDRLKQWRQAALALNASRRFAYTLDLKKEEERKQVMRKIRNHAEAIRNAHRFRAASEAVQPLLNSSDDDDDEEEEEEEDEEEKLQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00174 327 MobiDBLite consensus disorder prediction 292 327 - -
Aip01g00174 327 Pfam Ca2+-ATPase N terminal autoinhibitory domain 230 273 IPR024750 GO:0005516
Aip01g00174 327 PANTHER PROTEIN, PUTATIVE-RELATED 9 247 - -
Aip01g00174 327 Gene3D - 241 296 - -
Aip01g00174 327 MobiDBLite consensus disorder prediction 306 327 - -
Aip01g00174 327 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 247 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00174 Aip-Chr1 1731676 1732825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00174 227 311 Primary Pumps ATPases AT4G29900 59.551 6.86e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00174 - - mtr:MTR_5g073960 164.081