Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00172 ATGCAGCAAGATCACAGGAAAAAGAATTCAGCAGAGATGGATTTTTTCTCCGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTCTGTTCGGCCATTGACACTCATACAGGCGAAAAAGTGGCGATTAAGAAGATTCATGACATCTTCGAGCATATATCTGATGCCGCGCGTATCCTCCGTGAAATAAAGCTTCTTAGGCTTCTACGACATCCCGATATAGTTGAAATCAAACACATCATGCTGCCACCTTCTAGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTTATGGAGTCTGATCTTCATCAAGTCATCAAAGCCAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTTTACCAATTACTTCGAGCATTGAAGTATATTCACACAGCAAACGTTTATCATAGAGATTTGAAGCCAAAGAACATACTAGCAAATGCAAACTGTAAACTTAAAATTTGTGATTTCGGGTTAGCTAGAGTTGCCTTCAATGACACACCAACTACTATTTTTTGGACGGATTATGTTGCAACAAGGTGGTATAGAGCTCCGGAGCTTTGTGGATCATTTTATTCTAAGTATACACCAGCAATTGATATATGGAGCATCGGGTGCATCTTTGCCGAAGTGCTCACAGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCACCAGTTGGATCTGATGACAGATCTGCTTGGGACACCCTCACTGGATACCATATCACGGGTACGCAATGAGAAGGCACGGAGATACCTTACTAGCATGAGGAAAAAACAGCCTGTGCCATTTGCACATAAGTTTCCTAATGCAGACCCTTTAGCGCTACGACTACTAGAGAGATTGCTGGCTTTTGATCCGAAAGACCGACCTACTGCTGCAGAGGCATTGGCTGATCCTTACTTCAAGGGACTGGCTAAAGTTGAGAGAGAACCGTCCTGCCAGCCAATCACGAAAATGGAGTTCGAATTCGAAAGGCGAAGAGTCACGAAGGAGGAAATTCGTGAGCTAATTTTCCGTGAGATTCTAGAGTATCATCCACAATTATTGAAAGACTACATGAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCCGTTGATCAATTCCGGAAGCAGTTTGCTCATTTAGAGGAAAATGGTAAAAATGGACCAGCAGTGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTATACATTCAAACATTGCACCCACCAAAGAGCAGACGAGTATTGCTTCCTCAAAAAACCGGCAAACAGCTGAAGACTATAACAAGAGCTCAAGAGATACAGAAATTACAGTGCCACGGCCGATGCCAGGTGCCCAAAGAATTCCACTAGCAAAACCTGGTAAAGTTGTTGGGCCGGTTGGACCGTACGAGTATGCGAGTGTTGTCAAGGATTCTTATGATCCAAGAACATTAGTAAGAGGTTCTGTGGTTCCTTCTCAACCTGTTCCCACAGCATACTATTACCATAGTTCTAGCACCAGTAATCGACCGGCAACAGAAGCCGATAAGGGCGTTCCTTTGCAGGCAACAACACATGGTCAACAATGTGGAGTTAATGCCAAGATAGCGCCGGATATAGCAATCAATATCGACAAGAACCCATTTTTCATGACGCGTGTGGGAGTGAACAAGCTAGAACAAGATGATCAAATAGCTATAGAAACAAATTTGCTGCAATCTAAGGCTCAATATGGTGGGATTAGTGCTGCAGCTGGAGCCACTGCTCATAGAAAAGTTGGACCTGTTCAGTATGGTATGACAAGAATGTTCTAA 1839 0.4247 MQQDHRKKNSAEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAHKFPNADPLALRLLERLLAFDPKDRPTAAEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPAVPLDRKHVSLPRSTIIHSNIAPTKEQTSIASSKNRQTAEDYNKSSRDTEITVPRPMPGAQRIPLAKPGKVVGPVGPYEYASVVKDSYDPRTLVRGSVVPSQPVPTAYYYHSSSTSNRPATEADKGVPLQATTHGQQCGVNAKIAPDIAINIDKNPFFMTRVGVNKLEQDDQIAIETNLLQSKAQYGGISAAAGATAHRKVGPVQYGMTRMF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00172 612 MobiDBLite consensus disorder prediction 425 465 - -
Aip01g00172 612 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Aip01g00172 612 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00172 612 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Aip01g00172 612 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Aip01g00172 612 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00172 612 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip01g00172 612 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 490 - -
Aip01g00172 612 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Aip01g00172 612 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00172 612 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 490 - -
Aip01g00172 612 MobiDBLite consensus disorder prediction 425 439 - -
Aip01g00172 612 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00172 Aip-Chr1 1708240 1713422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00172 1 435 MAP Kinase Gene Family AT2G42880 88.761 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip01g00172 Pkinase 9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00172 - - gmx:100811788 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00172 01 1708240 1713422 Aip07g00432 07 3715671 3719167 PCT